RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SLC26A7Q8TE54 656 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 TNFRSF14Q92956 283 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 PRRC1Q96M27 445 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 Q96M85 177 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 COQ7Q99807 217 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 CCDC28BQ9BUN5 200 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 HDHD2Q9H0R4 259 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 CENPHQ9H3R5 247 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 RNF7Q9UBF6 113 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 KAAG1Q9UBP8 84 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 RPUSD1Q9UJJ7 312 aaKnown RBP5.94□□□□□ -1.46
ATXN3-219ENST00000553488 A4GNTQ9UNA3 340 aa5.94□□□□□ -1.46
ATXN3-219ENST00000553488 HTR3EA5X5Y0 456 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 BTBD17A6NE02 478 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 K7EIL1 84 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 CDC42EP2O14613 210 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 DVL1O14640 695 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 NPFFO15130 113 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 AHCYL1O43865 530 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 ECDO95905 644 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-219ENST00000553488 GYPAP02724 150 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 CD14P08571 375 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 ACSM4P0C7M7 580 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 CPEP16870 476 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 OR1E2P47887 323 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 SLC9A3P48764 834 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 ELF3P78545 371 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-219ENST00000553488 PRB3Q04118 309 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-219ENST00000553488 PRKCDQ05655 676 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 KLRD1Q13241 179 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 KRR1Q13601 381 aaKnown RBP5.93□□□□□ -1.46
ATXN3-219ENST00000553488 KCNJ8Q15842 424 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 ANKDD1AQ495B1 522 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 TEX36Q5VZQ5 186 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 C11orf88Q6PI97 169 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 CRIP3Q6Q6R5 217 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 CALHM3Q86XJ0 350 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 GLB1L2Q8IW92 636 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 OFCC1Q8IZS5 231 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 Q8N7P7 452 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 SVIPQ8NHG7 77 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 WIPF2Q8TF74 440 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-219ENST00000553488 NPRL2Q8WTW4 380 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 C7orf26Q96N11 449 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 ZNF570Q96NI8 536 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 ADAT1Q9BUB4 502 aaKnown RBP5.93□□□□□ -1.46
ATXN3-219ENST00000553488 SYT4Q9H2B2 425 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 PPA2Q9H2U2 334 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 FN3KRPQ9HA64 309 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 TRIM36Q9NQ86 728 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 SIRT7Q9NRC8 400 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 VSX1Q9NZR4 365 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-219ENST00000553488 BAG5Q9UL15 447 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 FAM96BQ9Y3D0 163 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 DSCAML1Q8TD84 2053 aa5.93□□□□□ -1.46
ATXN3-219ENST00000553488 CSMD3Q7Z407 3707 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 TRAV38-1A0A0B4J264 116 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 LOC100653049A0A140TA62 436 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 ANKRD61A6NGH8 418 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 H3BUX3 64 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-219ENST00000553488 FXYD1O00168 92 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 DCTN6O00399 190 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 XKRYO14609 159 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 NDUFA2O43678 99 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 XPNPEP2O43895 674 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 SLC16A7O60669 478 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 KHDRBS3O75525 346 aaKnown RBP5.92□□□□□ -1.46
ATXN3-219ENST00000553488 KRT34O76011 436 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 LHBP01229 141 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 CA6P23280 308 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 SAA4P35542 130 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 KIR2DS4P43632 304 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 FXYD6P3P58550 94 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 ST3GAL3Q11203 375 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 OR8B8Q15620 311 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 MEP1BQ16820 701 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 CFAP77Q6ZQR2 320 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 ZNF826PQ6ZT77 177 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 PTCHD4Q6ZW05 846 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 OAFQ86UD1 273 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 LYG1Q8N1E2 194 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 PNKDQ8N490 385 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 FAM216BQ8N7L0 139 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 BOLLQ8N9W6 283 aaKnown RBP5.92□□□□□ -1.46
ATXN3-219ENST00000553488 BEND2Q8NDZ0 799 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 C8orf46Q8TAG6 207 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 C17orf50Q8WW18 174 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 ST8SIA4Q92187 359 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 C16orf92Q96LL3 132 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 GPX7Q96SL4 187 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-219ENST00000553488 HCAR1Q9BXC0 346 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 MMP28Q9H239 520 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 RANBP3Q9H6Z4 567 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-219ENST00000553488 PNRC2Q9NPJ4 139 aaKnown RBP5.92□□□□□ -1.46
ATXN3-219ENST00000553488 ONECUT1Q9UBC0 465 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 GRHPRQ9UBQ7 328 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 CAB39Q9Y376 341 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-219ENST00000553488 MAB21L2Q9Y586 359 aa5.92□□□□□ -1.46
ATXN3-219ENST00000553488 TENM2Q9NT68 2774 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms