RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 OR52A1Q9UKL2 312 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 GTF2A1LQ9UNN4 478 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 CAB39Q9Y376 341 aaPredicted RBP8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 N6AMT1Q9Y5N5 214 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 TMEM212A6NML5 194 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 PPIHO43447 177 aaKnown RBP8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 GATBO75879 557 aaKnown RBP8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 DHRS3O75911 302 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 CST4P01036 141 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 IGHA1P01876 353 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 HTR1AP08908 422 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 VHLP40337 213 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 RANBP1P43487 201 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 FAM3AP98173 230 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 SCGB2A2Q13296 93 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 RIN1Q13671 783 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 TSTQ16762 297 aaKnown RBP8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 C11orf91Q3C1V1 193 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 SNAI3Q3KNW1 292 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 CDONQ4KMG0 1287 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 LIPNQ5VXI9 398 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 OTPQ5XKR4 325 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 KRT74Q7RTS7 529 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 PRSS45Q7RTY3 260 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 KLHL36Q8N4N3 616 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 Q8TCH9 128 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 PP6455Q8WZ26 134 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 CCL17Q92583 94 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 MYDGFQ969H8 173 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 SGK3Q96BR1 496 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 LGALS12Q96DT0 336 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 TMEM80Q96HE8 168 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 OR2V2Q96R30 315 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 ADAT1Q9BUB4 502 aaKnown RBP8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 RTL8AQ9BWD3 113 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 PAPOLGQ9BWT3 736 aaKnown RBP8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 COMMD4Q9H0A8 199 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 FGF20Q9NP95 211 aaPredicted RBP8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 BRD7Q9NPI1 651 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 FAM206AQ9NX38 181 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 GNG8Q9UK08 70 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 TPRKBQ9Y3C4 175 aa8.73□□□□□ -1.01
TRAFD1-208ENST00000552890 hCG_38984A0A1B0GV85 526 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 ZSCAN5BA6NJL1 495 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 OR5B21A6NL26 309 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 VWC2LB2RUY7 222 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 H7C1Q1 480 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 J3QRE1 110 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 DLGAP1O14490 977 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 FAM20BO75063 409 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 HPXP02790 462 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 ISG15P05161 165 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 SLC2A1P11166 492 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 TGM4P49221 684 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 ISL1P61371 349 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 MSMPQ1L6U9 139 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 GFOD2Q3B7J2 385 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 CYB5R2Q6BCY4 276 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 BCDIN3DQ7Z5W3 292 aaKnown RBP8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 OR5AS1Q8N127 324 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 STX19Q8N4C7 294 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 BHLHE23Q8NDY6 225 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 OR56B2PQ8NGI1 322 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 OR5A2Q8NGI9 324 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 MEGF10Q96KG7 1140 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 SIGLEC11Q96RL6 698 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 ALG8Q9BVK2 526 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 MRM2Q9UI43 246 aaKnown RBP8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 RAB26Q9ULW5 256 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 PCDHB10Q9UN67 800 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 DIMT1Q9UNQ2 313 aaKnown RBP8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 SLC7A11Q9UPY5 501 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 ERGIC3Q9Y282 383 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 PCDHGB5Q9Y5G0 923 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 CSMD2Q7Z408 3487 aa8.72□□□□□ -1.01
TRAFD1-208ENST00000552890 CYSRT1A8MQ03 144 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 B4DSR2 109 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 RNF223E7ERA6 249 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 M0R129 80 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 SYT7O43581 403 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 NDUFS7O75251 213 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 ATP6V1G2O95670 118 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 PTBP3O95758 552 aaKnown RBP8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 CD2P06729 351 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 OCM2P0CE71 109 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 OCMP0CE72 109 aaPredicted RBP8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 HNF1AP20823 631 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 CA6P23280 308 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 GATA3P23771 443 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 CFHR2P36980 270 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 MDH2P40926 338 aaKnown RBP8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 MAGEB1P43366 347 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 GNG3P63215 75 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 ALKBH6Q3KRA9 238 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 TMEM155Q4W5P6 130 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 CLVS2Q5SYC1 327 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 ZNF684Q5T5D7 378 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 NLRC3Q7RTR2 1065 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 NAA40Q86UY6 237 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 CATSPERDQ86XM0 798 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms