RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 COMMD3-BMI1R4GMX3 469 aa9.91□□□□□ -0.82
CKAP4-202ENST00000552828 IGHV2-70DA0A0C4DH43 119 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 KIR2DS1A0A191URI9 304 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 A0A1B0GWJ7 208 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 A6NHS1 94 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 PRKYO43930 277 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 SPARCP09486 303 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 POLR2IP36954 125 aaKnown RBP9.9□□□□□ -0.82
CKAP4-202ENST00000552828 PCK2Q16822 640 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 ZNF181Q2M3W8 571 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 C12orf73Q69YU5 71 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 LYPD4Q6UWN0 246 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 BTNL3Q6UXE8 466 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 FBXW12Q6X9E4 464 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 CFAP77Q6ZQR2 320 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 ERI1Q8IV48 349 aaKnown RBP9.9□□□□□ -0.82
CKAP4-202ENST00000552828 TCEANCQ8N8B7 351 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 RAB40AQ8WXH6 277 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 SLC7A6Q92536 515 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 TMIGD2Q96BF3 282 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 INTS14Q96SY0 518 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 SSBP3Q9BWW4 388 aaPredicted RBP9.9□□□□□ -0.82
CKAP4-202ENST00000552828 H2AFY2Q9P0M6 372 aaPredicted RBP9.9□□□□□ -0.82
CKAP4-202ENST00000552828 MIOXQ9UGB7 285 aa9.9□□□□□ -0.82
CKAP4-202ENST00000552828 SOX21Q9Y651 276 aaPredicted RBP9.9□□□□□ -0.82
CKAP4-202ENST00000552828 A0A1B0GUS0 222 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 MDKP21741 143 aaPredicted RBP9.89□□□□□ -0.83
CKAP4-202ENST00000552828 RPS27P42677 84 aaKnown RBP9.89□□□□□ -0.83
CKAP4-202ENST00000552828 RGS6P49758 472 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 EFNB1P98172 346 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 APOFQ13790 326 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 LCN1P1Q5VSP4 162 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 SHFQ7M4L6 423 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 DCXRQ7Z4W1 244 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 KLBQ86Z14 1044 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 BBS1Q8NFJ9 593 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 OR8G5Q8NG78 346 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 OR6N2Q8NGY6 317 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 OR13G1Q8NGZ3 307 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 TMEM163Q8TC26 289 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 SPTSSAQ969W0 71 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 MAP6Q96JE9 813 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 MEGF10Q96KG7 1140 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 SLC29A1Q99808 456 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 ATF6BQ99941 703 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 MARCH7Q9H992 704 aa9.89□□□□□ -0.83
CKAP4-202ENST00000552828 PNRC2Q9NPJ4 139 aaKnown RBP9.89□□□□□ -0.83
CKAP4-202ENST00000552828 IGHV3OR16-10A0A075B7F0 116 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 F5H5K5 113 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 DBHP09172 617 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 RPS2P15880 293 aaKnown RBP9.88□□□□□ -0.83
CKAP4-202ENST00000552828 SLC2A5P22732 501 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 SRP9P49458 86 aaKnown RBP9.88□□□□□ -0.83
CKAP4-202ENST00000552828 TPTEP56180 551 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 BPIFB3P59826 476 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 CDC42P60953 191 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 EIF2B1Q14232 305 aaKnown RBP9.88□□□□□ -0.83
CKAP4-202ENST00000552828 HLXQ14774 488 aaPredicted RBP9.88□□□□□ -0.83
CKAP4-202ENST00000552828 TAF13Q15543 124 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 RSPO1Q2MKA7 263 aaPredicted RBP9.88□□□□□ -0.83
CKAP4-202ENST00000552828 ZIK1Q3SY52 487 aaPredicted RBP9.88□□□□□ -0.83
CKAP4-202ENST00000552828 ZNF404Q494X3 552 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 NXNL2Q5VZ03 156 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 DPY19L4Q7Z388 723 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 TIGD4Q8IY51 512 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 ZNF454Q8N9F8 522 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 OR5L1Q8NGL2 311 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 OR8J1Q8NGP2 316 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 NRG4Q8WWG1 115 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 TRUB1Q8WWH5 349 aaKnown RBP9.88□□□□□ -0.83
CKAP4-202ENST00000552828 TAF15Q92804 592 aaKnown RBP eCLIP9.88□□□□□ -0.83
CKAP4-202ENST00000552828 APOBEC3DQ96AK3 386 aaPredicted RBP9.88□□□□□ -0.83
CKAP4-202ENST00000552828 NEIL1Q96FI4 390 aaPredicted RBP9.88□□□□□ -0.83
CKAP4-202ENST00000552828 NR1H4Q96RI1 486 aaPredicted RBP9.88□□□□□ -0.83
CKAP4-202ENST00000552828 IL4I1Q96RQ9 567 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 TEAD3Q99594 435 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 SLC30A2Q9BRI3 323 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 TMEM246Q9BRR3 403 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 CENPMQ9NSP4 180 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 IMPAD1Q9NX62 359 aa9.88□□□□□ -0.83
CKAP4-202ENST00000552828 SLC22A31A6NKX4 558 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 LRRC30A6NM36 301 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 SRRM5B3KS81 715 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 M0R129 80 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 MLNRO43193 412 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 HOXA3O43365 443 aaPredicted RBP9.87□□□□□ -0.83
CKAP4-202ENST00000552828 SELENOFO60613 162 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 CYB5R3P00387 301 aaPredicted RBP9.87□□□□□ -0.83
CKAP4-202ENST00000552828 PSKH1P11801 424 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 PMELP40967 661 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 GATA4P43694 442 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 SLC15A1P46059 708 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 GNB2P62879 340 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 KRTAP27-1Q3LI81 207 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 MIDNQ504T8 468 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 AADACL4Q5VUY2 407 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 OR2T2Q6IF00 324 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 SPATC1Q76KD6 591 aa9.87□□□□□ -0.83
CKAP4-202ENST00000552828 MEPCEQ7L2J0 689 aaKnown RBP9.87□□□□□ -0.83
CKAP4-202ENST00000552828 GID4Q8IVV7 300 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms