RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 SHMT2P34897 504 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 HMGCLP35914 325 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 UGT2B10P36537 528 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 MAP3K8P41279 467 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 XCR1P46094 333 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 PLP1P60201 277 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 KCNJ2P63252 427 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 BTG2P78543 158 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 CDK16Q00536 496 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 CALCOCO2Q13137 446 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 PPP1R3AQ16821 1122 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 MICBQ29980 383 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 GLYR1Q49A26 553 aaPredicted RBP2.99□□□□□ -1.93
LIMA1-208ENST00000551691 CCSMST1Q4G0I0 132 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 RESP18Q5W5W9 173 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 PVRIGQ6DKI7 326 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 PGAP1Q75T13 922 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 MICU2Q8IYU8 434 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 CADM2Q8N3J6 435 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 SVOPLQ8N434 492 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 CSNK1A1LQ8N752 337 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 C17orf47Q8NEP4 570 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 SDR9C7Q8NEX9 313 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 OR5T3Q8NGG3 340 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 OR4Q3Q8NH05 313 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 NEIL3Q8TAT5 605 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 C11orf45Q8TAV5 145 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 STARD4Q96DR4 205 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 SEC22AQ96IW7 307 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 PLEKHA8Q96JA3 519 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 TRIB3Q96RU7 358 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 RNF2Q99496 336 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 BPIFA3Q9BQP9 254 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 RHOXF2Q9BQY4 288 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 SNRNP25Q9BV90 132 aaKnown RBP2.99□□□□□ -1.93
LIMA1-208ENST00000551691 HCAR1Q9BXC0 346 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 PARLQ9H300 379 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 RHBGQ9H310 441 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 IKZF5Q9H5V7 419 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 REEP4Q9H6H4 257 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 NARFLQ9H6Q4 476 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 AUNIPQ9H7T9 357 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 GEMIN7Q9H840 131 aaKnown RBP2.99□□□□□ -1.93
LIMA1-208ENST00000551691 ISG20L2Q9H9L3 353 aaKnown RBP2.99□□□□□ -1.93
LIMA1-208ENST00000551691 CCNB1IP1Q9NPC3 277 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 C14orf105Q9NVL8 296 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 PAK1IP1Q9NWT1 392 aaPredicted RBP2.99□□□□□ -1.93
LIMA1-208ENST00000551691 MLXQ9UH92 298 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 ZNF223Q9UK11 482 aaPredicted RBP2.99□□□□□ -1.93
LIMA1-208ENST00000551691 PLLPQ9Y342 182 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 STARD10Q9Y365 291 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 MED12LQ86YW9 2145 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 ABCA13Q86UQ4 5058 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 KIAA1109Q2LD37 5005 aa2.99□□□□□ -1.93
LIMA1-208ENST00000551691 DNAH7Q8WXX0 4024 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 GLYATL1P3A0A0U1RQE8 302 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 TCRBV9S1A1TA0A576 114 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 ZNF860A6NHJ4 632 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 SIGLEC16A6NMB1 481 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 IFITM10A6NMD0 228 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 B4DXG7 233 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 SULT2B1O00204 365 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 CCL22O00626 93 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 PPP1R2P9O14990 202 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 TRAPPC6AO75865 159 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 TNFSF13O75888 250 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 RCBTB2O95199 551 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 GNA14O95837 355 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 TGM6O95932 706 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 CST1P01037 141 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 ZSCAN5DPP0CG00 497 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 COX5AP20674 150 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 SYT1P21579 422 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 CD9P21926 228 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 SLC2A5P22732 501 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 HSD17B2P37059 387 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 CD79BP40259 229 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 RPL26P61254 145 aaKnown RBP2.98□□□□□ -1.93
LIMA1-208ENST00000551691 MRPS11P82912 194 aaKnown RBP2.98□□□□□ -1.93
LIMA1-208ENST00000551691 CHRNB3Q05901 458 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 SERTAD2Q14140 314 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 GRB7Q14451 532 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 KCNJ11Q14654 390 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 EIPR1Q53HC9 387 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 LINC00242Q5T6M2 205 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 PLCXD3Q63HM9 321 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 PAQR6Q6TCH4 344 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 STAC2Q6ZMT1 411 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 VTCN1Q7Z7D3 282 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 FAM71AQ8IYT1 594 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 ATPAF2Q8N5M1 289 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 OTUD6BQ8N6M0 293 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 ZNF491Q8N8L2 437 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 ZDHHC22Q8N966 263 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 ACOT4Q8N9L9 421 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 Q8NBF4 154 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 PLPP5Q8NEB5 264 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 MRAPQ8TCY5 172 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 VN1R17PQ8TDU5 208 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 C10orf105Q8TEF2 133 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms