RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ENSAO43768 121 aaKnown RBP5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 IGF2P01344 180 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 IFNA14P01570 189 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 VIMP08670 466 aaKnown RBP5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 COX4I1P13073 169 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 IRF2P14316 349 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 AMY2BP19961 511 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 IER3P46695 156 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 PROK1P58294 105 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 LSM6P62312 80 aaKnown RBP5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 COX10Q12887 443 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 LSAMPQ13449 338 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 GFOD2Q3B7J2 385 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 KRTAP27-1Q3LI81 207 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 FAM205BPQ63HN1 556 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 ERICH5Q6P6B1 374 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 ZNF620Q6ZNG0 422 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 DCDC5Q6ZRR9 648 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 COLCA1Q6ZS62 124 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 C1orf122Q6ZSJ8 110 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 PGAP1Q75T13 922 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 RRM2BQ7LG56 351 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 MRPL21Q7Z2W9 205 aaKnown RBP5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 C11orf53Q8IXP5 236 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 BATF2Q8N1L9 274 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 GCSAMQ8N6F7 178 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 PCYOX1LQ8NBM8 494 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 GJC3Q8NFK1 279 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 OR56B2PQ8NGI1 322 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 FANK1Q8TC84 345 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 TSPEARQ8WU66 669 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 KIRREL1Q96J84 757 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 IFT27Q9BW83 186 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 HCAR1Q9BXC0 346 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 FGF23Q9GZV9 251 aaPredicted RBP5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 WDR13Q9H1Z4 485 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 PPA2Q9H2U2 334 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 MED20Q9H944 212 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 CENPMQ9NSP4 180 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 ACOXLQ9NUZ1 547 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 DNAJC27Q9NZQ0 273 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 RNF7Q9UBF6 113 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 FBLN5Q9UBX5 448 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 CAPN7Q9Y6W3 813 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 RYR3Q15413 4870 aa5.62□□□□□ -1.51
PRPF40B-214ENST00000551320 A0A0G2JK05 382 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 GMNCA6NCL1 334 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 LRRC30A6NM36 301 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 RNASEK-C17orf49H0YIS7 233 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 LGALS8O00214 317 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 ACOT8O14734 319 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 TROVE2P10155 538 aaKnown RBP eCLIP5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 NR2C1P13056 603 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 JUNBP17275 347 aaPredicted RBP5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 CD200P41217 278 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 GYS2P54840 703 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 HABP2Q14520 560 aaPredicted RBP5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 KCNMB1Q16558 191 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 PCK2Q16822 640 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 RFX4Q33E94 735 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 PLA1AQ53H76 456 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 WDR38Q5JTN6 314 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 SLC35E4Q6ICL7 350 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 Q8N7P7 452 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 OR5L1Q8NGL2 311 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 OR8D4Q8NGM9 314 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 OR11L1Q8NGX0 322 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 OR2AJ1Q8NGZ0 328 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 LRRC29Q8WV35 223 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 H1FXQ92522 213 aaKnown RBP5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 C7orf34Q96L11 122 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 AMELYQ99218 206 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 COQ7Q99807 217 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 ATF6BQ99941 703 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 SH3GL1Q99961 368 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 KCTD14Q9BQ13 255 aaPredicted RBP5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 FUZQ9BT04 418 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 POLR2J2Q9GZM3 115 aaKnown RBP5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 POLR2J3Q9H1A7 115 aaKnown RBP5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 MMP27Q9H306 513 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 OR52D1Q9H346 318 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 PRDM13Q9H4Q3 707 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 ZMAT3Q9HA38 289 aaKnown RBP5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 GID8Q9NWU2 228 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 ZNF319Q9P2F9 582 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 ERVK-18Q9QC07 812 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 CYB5R1Q9UHQ9 305 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 MMP24Q9Y5R2 645 aa5.61□□□□□ -1.51
PRPF40B-214ENST00000551320 A0A1B0GWJ7 208 aa5.6□□□□□ -1.51
PRPF40B-214ENST00000551320 OOEPA6NGQ2 149 aa5.6□□□□□ -1.51
PRPF40B-214ENST00000551320 HMGB1P1B2RPK0 211 aaPredicted RBP5.6□□□□□ -1.51
PRPF40B-214ENST00000551320 M0QZ24 198 aa5.6□□□□□ -1.51
PRPF40B-214ENST00000551320 M0R135 149 aa5.6□□□□□ -1.51
PRPF40B-214ENST00000551320 PHYHO14832 338 aa5.6□□□□□ -1.51
PRPF40B-214ENST00000551320 DNAJC8O75937 253 aaPredicted RBP5.6□□□□□ -1.51
PRPF40B-214ENST00000551320 NDUFA7O95182 113 aa5.6□□□□□ -1.51
PRPF40B-214ENST00000551320 SOX14O95416 240 aa5.6□□□□□ -1.51
PRPF40B-214ENST00000551320 RENP00797 406 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms