RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 ZFP36L1Q07352 338 aaKnown RBP4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 ODF4Q2M2E3 257 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 Q499Y3 187 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF658BQ4V348 819 aaPredicted RBP4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 MIDNQ504T8 468 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 TP53I3Q53FA7 332 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 SOHLH1Q5JUK2 328 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF506Q5JVG8 444 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 PIP5KL1Q5T9C9 394 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 CYB5RLQ6IPT4 315 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 ARMC6Q6NXE6 501 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF343Q6P1L6 599 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF529Q6P280 563 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 TMEM220Q6QAJ8 160 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 AGTRAPQ6RW13 159 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 TEX43Q6ZNM6 134 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 TCF24Q7RTU0 167 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 TMED4Q7Z7H5 227 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 C1orf87Q8N0U7 546 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 LYG1Q8N1E2 194 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 AMER3Q8N944 861 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 EXD3Q8N9H8 876 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 APCDD1LQ8NCL9 501 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 NAXEQ8NCW5 288 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF248Q8NDW4 579 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 BHLHE23Q8NDY6 225 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 OR5K2Q8NHB8 316 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 OR14L1PQ8NHC6 308 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 STT3BQ8TCJ2 826 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 RNF128Q8TEB7 428 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 CASTOR1Q8WTX7 329 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 C2orf15Q8WU43 125 aaKnown RBP4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 METTL21AQ8WXB1 218 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 SMARCD2Q92925 531 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 DVL3Q92997 716 aaPredicted RBP4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 TMEM230Q96A57 120 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF845Q96IR2 970 aaPredicted RBP4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 SLC41A2Q96JW4 573 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 FAM71F1Q96KD3 344 aaPredicted RBP4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 C2orf50Q96LR7 162 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 GAL3ST4Q96RP7 486 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 SLC22A12Q96S37 553 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 TBX5Q99593 518 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 NUDT16L1Q9BRJ7 211 aaKnown RBP4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 C16orf70Q9BSU1 422 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 C20orf24Q9BUV8 137 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 SF3B5Q9BWJ5 86 aaKnown RBP4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 OR2J1Q9GZK6 312 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF350Q9GZX5 532 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 MAGT1Q9H0U3 335 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 SLC25A18Q9H1K4 315 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 SYNPO2LQ9H987 977 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 GOLGA2P5Q9HBQ8 144 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 B3GAT1Q9P2W7 334 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 CD84Q9UIB8 345 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 MSRAQ9UJ68 235 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 RNF115Q9Y4L5 304 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 MTCL1Q9Y4B5 1905 aaKnown RBP4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 COL4A3Q01955 1670 aa4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 NUP214P35658 2090 aaPredicted RBP4.69□□□□□ -1.66
LSM3P2-201ENST00000551246 THSD7AQ9UPZ6 1657 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 TRAV8-7A0A075B6U6 113 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 A0A0D9SEW6 157 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 CLEC18AA5D8T8 446 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF736B4DX44 427 aaPredicted RBP4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 EEF1E1-BLOC1S5C9J1V9 151 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 PRRT4C9JH25 899 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 CDC40O60508 579 aaKnown RBP eCLIP4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 RCBTB2O95199 551 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 LCATP04180 440 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 HSPB1P04792 205 aaKnown RBP4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 TYMSP04818 313 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 LGALS2P05162 132 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 DCNP07585 359 aaKnown RBP4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 PFN1P07737 140 aaKnown RBP4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 MMP3P08254 477 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 JMJD7P0C870 316 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 PGA3P0DJD8 388 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 CTSAP10619 480 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 IRF1P10914 325 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 OR10J1P30954 320 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 BMI1P35226 326 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 SOAT1P35610 550 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 BSGP35613 385 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 ARR3P36575 388 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 NAA10P41227 235 aaPredicted RBP4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 APOBEC1P41238 236 aaKnown RBP4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 TSFMP43897 325 aaKnown RBP4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 OR3A2P47893 321 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 TM4SF4P48230 202 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 KHKP50053 298 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 HMGCS2P54868 508 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 TAS2R41P59536 307 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 ARF6P62330 175 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 UBE2V1Q13404 147 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 PCK2Q16822 640 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 C2orf76Q3KRA6 126 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 LRRC37A5PQ49AS3 106 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 MORN2Q502X0 79 aa4.68□□□□□ -1.66
LSM3P2-201ENST00000551246 COL5A1-AS1Q5SY13 56 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms