RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 ANKRD30BLA7E2S9 258 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 ZNF878C9JN71 531 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 KRT36O76013 467 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 FABP3P05413 133 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 FBP1P09467 338 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 HSD17B1P14061 328 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 RRM2P31350 389 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 FMO3P31513 532 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 PYCR1P32322 319 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 ENTPD1P49961 510 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 PGBD2Q6P3X8 592 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 ZNF826PQ6ZT77 177 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 SLC36A1Q7Z2H8 476 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 VMO1Q7Z5L0 202 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 CMTM4Q8IZR5 234 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 LINC00471Q8N535 108 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 OR8S1Q8NH09 359 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 ST8SIA4Q92187 359 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 C12orf43Q96C57 262 aaKnown RBP10.59□□□□□ -0.71
PTCH1-221ENST00000550914 MYLK2Q9H1R3 596 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 SP140LQ9H930 580 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 TCF7L1Q9HCS4 588 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 IL1RAPQ9NPH3 570 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 IL20Q9NYY1 176 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 FAM96BQ9Y3D0 163 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 NOTCH3Q9UM47 2321 aa10.59□□□□□ -0.71
PTCH1-221ENST00000550914 C5orf63A6NC05 138 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 BTBD17A6NE02 478 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 TVP23AA6NH52 213 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 TSPAN9O75954 239 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 ANOS1P23352 680 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 CFL1P23528 166 aaKnown RBP10.58□□□□□ -0.72
PTCH1-221ENST00000550914 NAA10P41227 235 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-221ENST00000550914 RPS27P42677 84 aaKnown RBP10.58□□□□□ -0.72
PTCH1-221ENST00000550914 SLC15A1P46059 708 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 PRKXP51817 358 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 HMGA2P52926 109 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 BLVRAP53004 296 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 GRB2P62993 217 aaKnown RBP10.58□□□□□ -0.72
PTCH1-221ENST00000550914 GUCA2AQ02747 115 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 TAF13Q15543 124 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 Q6ZSV7 163 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 C11orf53Q8IXP5 236 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 RNF148Q8N7C7 305 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 CYB561A3Q8NBI2 242 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 OR1M1Q8NGA1 313 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 C8orf46Q8TAG6 207 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 SLAMF6Q96DU3 332 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 DNTTIP1Q9H147 329 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 TOR3AQ9H497 397 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 EGLN3Q9H6Z9 239 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 ZNRD1Q9P1U0 126 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 VPREB3Q9UKI3 123 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 PRPF19Q9UMS4 504 aaKnown RBP10.58□□□□□ -0.72
PTCH1-221ENST00000550914 V9GYQ6 96 aa10.58□□□□□ -0.72
PTCH1-221ENST00000550914 IGHV3OR15-7A0A075B7D8 119 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 APOC1P02654 83 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 SPARCP09486 303 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 SLC2A1P11166 492 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 PSKH1P11801 424 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 EEF1B2P24534 225 aaKnown RBP10.57□□□□□ -0.72
PTCH1-221ENST00000550914 TGFBR2P37173 567 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 SLC25A1P53007 311 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 FAM3AP98173 230 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 SNCBQ16143 134 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 C2orf68Q2NKX9 166 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 WDR38Q5JTN6 314 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 SAMD4BQ5PRF9 694 aaKnown RBP10.57□□□□□ -0.72
PTCH1-221ENST00000550914 ATPAF1Q5TC12 328 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-221ENST00000550914 DHRS7BQ6IAN0 325 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-221ENST00000550914 LYPD4Q6UWN0 246 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 WDR82Q6UXN9 313 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 C1orf122Q6ZSJ8 110 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 RASSF6Q6ZTQ3 369 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 SLC16A9Q7RTY1 509 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 DPY19L4Q7Z388 723 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 LNX2Q8N448 690 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 SLC37A3Q8NCC5 494 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 OR52H1Q8NGJ2 320 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 OR5R1Q8NH85 324 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 LRRC29Q8WV35 223 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 ZNRF4Q8WWF5 429 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 NSMCE2Q96MF7 247 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 CCL13Q99616 98 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 PKP2Q99959 881 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 NMNAT2Q9BZQ4 307 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 TLNRD1Q9H1K6 362 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 CENPMQ9NSP4 180 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 ONECUT1Q9UBC0 465 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 BAIAP2Q9UQB8 552 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 PLXNB1O43157 2135 aa10.57□□□□□ -0.72
PTCH1-221ENST00000550914 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-221ENST00000550914 ZNF593O00488 134 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-221ENST00000550914 NDUFB3O43676 98 aa10.56□□□□□ -0.72
PTCH1-221ENST00000550914 TGM4P49221 684 aa10.56□□□□□ -0.72
PTCH1-221ENST00000550914 POU4F2Q12837 409 aa10.56□□□□□ -0.72
PTCH1-221ENST00000550914 TIGD6Q17RP2 521 aa10.56□□□□□ -0.72
PTCH1-221ENST00000550914 SPATS1Q496A3 300 aa10.56□□□□□ -0.72
PTCH1-221ENST00000550914 LRRC10Q5BKY1 277 aa10.56□□□□□ -0.72
PTCH1-221ENST00000550914 WDR86Q86TI4 376 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms