RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 CDC14BO60729 498 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 HLA-DPB1P04440 258 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 CD55P08174 381 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 CA6P23280 308 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 CSNK2BP67870 215 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 ST3GAL4Q11206 333 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 TNK1Q13470 666 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 DNM1P46Q6ZS02 220 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 CATSPERDQ86XM0 798 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 CSNK2A3Q8NEV1 391 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 OR10AD1Q8NGE0 317 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 FAM71F1Q96KD3 344 aaPredicted RBP13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 ZNF649Q9BS31 505 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 SOX7Q9BT81 388 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 JAM3Q9BX67 310 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 GPR84Q9NQS5 396 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 CHCHD3Q9NX63 227 aaKnown RBP13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 MRPL15Q9P015 296 aaKnown RBP13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 PSORS1C1Q9UIG5 152 aa13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 DIMT1Q9UNQ2 313 aaKnown RBP13.78□□□□□ -0.2
CHMP1A-209ENST00000550872 IGHV1-69-2A0A0G2JMI3 117 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 LOC390937A0A1W2PQ73 354 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 P2RY10O00398 339 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 MLNRO43193 412 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 HTR1AP08908 422 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 LIMS3P0CW19 117 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 LIMS4P0CW20 117 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 PIPP12273 146 aaPredicted RBP13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 MYL12AP19105 171 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 CRYBB2P43320 205 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 MAP2K3P46734 347 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 ETV1P50549 477 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 MRPS11P82912 194 aaKnown RBP13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 MED21Q13503 144 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 OR8G1Q15617 311 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 OR8B8Q15620 311 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 SNCBQ16143 134 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 ODF4Q2M2E3 257 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 KRTAP21-3Q3LHN1 58 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 SPRNQ5BIV9 151 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 AHSA2Q719I0 299 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 EGFL6Q8IUX8 553 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 SYS1Q8N2H4 156 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 STX19Q8N4C7 294 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 ZNF540Q8NDQ6 660 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 C10orf105Q8TEF2 133 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 ITLN1Q8WWA0 313 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 YIPF5Q969M3 257 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 PELI1Q96FA3 418 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 CNBD2Q96M20 576 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 OR2V2Q96R30 315 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 ISG20L2Q9H9L3 353 aaKnown RBP13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 CNOT2Q9NZN8 540 aaKnown RBP13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 IL19Q9UHD0 177 aa13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 EXOSC1Q9Y3B2 195 aaKnown RBP13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 NOP16Q9Y3C1 178 aaKnown RBP13.77□□□□□ -0.21
CHMP1A-209ENST00000550872 MED13LQ71F56 2210 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 IGHV4-30-2A0A087WSY4 118 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 F5H5P2 479 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 NDUFS8O00217 210 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 GMDSO60547 372 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 MTRF1O75570 445 aaKnown RBP13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 ATP6V1B1P15313 513 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 TNFRSF1AP19438 455 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 ACHEP22303 614 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 ACKR3P25106 362 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 GNALP38405 381 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 SRP9P49458 86 aaKnown RBP13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 WDR38Q5JTN6 314 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 TMPRSS11AQ6ZMR5 421 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 PRSS35Q8N3Z0 413 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 FTMTQ8N4E7 242 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 OR2G2Q8NGZ5 317 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 MEGF10Q96KG7 1140 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 ZNF184Q99676 751 aaPredicted RBP13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 PIMREGQ9BSJ6 248 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 DLL4Q9NR61 685 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 SCN3BQ9NY72 215 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 TREM2Q9NZC2 230 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 CAB39Q9Y376 341 aaPredicted RBP13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 RHBDD3Q9Y3P4 386 aa13.76□□□□□ -0.21
CHMP1A-209ENST00000550872 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 IGHV3-64DA0A0J9YX35 117 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 A0A1B0GTI1 187 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 A0A1B0GWJ7 208 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 PTGES3LE9PB15 166 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 H7C1Q1 480 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 SLC1A7O00341 560 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 IGLV3-1P01715 115 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 SLC25A16P16260 332 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 KIR3DL2P43630 455 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 GBX2P52951 348 aaPredicted RBP13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 MVKQ03426 396 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 HFEQ30201 348 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 FDX2Q6P4F2 183 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 KLBQ86Z14 1044 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 KLHL36Q8N4N3 616 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 SPERTQ8NA61 448 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 SEMA6DQ8NFY4 1073 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 OR8S1Q8NH09 359 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms