RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.8□□□□□ -0.68
VDR-208ENST00000550325 C14orf166Q9Y224 244 aaKnown RBP10.8□□□□□ -0.68
VDR-208ENST00000550325 HIF3AQ9Y2N7 669 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 A0A087WZY1 265 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 BORCS7-ASMTA0A0B4J1R7 106 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 CCDC163A0A0D9SF12 145 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 IFNA21P01568 189 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 HCKP08631 526 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 H2BFMP0C1H6 154 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 VSIG8P0DPA2 414 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 CTLA4P16410 223 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 IGFALSP35858 605 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 TAS2R60P59551 318 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 DEFB103AP81534 67 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 UNC119Q13432 240 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 CCINQ13939 588 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 CDCP2Q5VXM1 449 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 WBP2NLQ6ICG8 309 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 FAHD2BQ6P2I3 314 aaPredicted RBP10.8□□□□□ -0.68
VDR-208ENST00000550325 LINC00114Q6XXX2 140 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 REC114Q7Z4M0 266 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 HOGA1Q86XE5 327 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 FAHD2AQ96GK7 314 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 OR2A5Q96R48 311 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 TAAR9Q96RI9 348 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 KLHDC3Q9BQ90 382 aa10.8□□□□□ -0.68
VDR-208ENST00000550325 CDC14CA4D256 554 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 TAAR5O14804 337 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 SYT7O43581 403 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 SOX15O60248 233 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 SLC2A1P11166 492 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 ACKR1Q16570 336 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 SP6Q3SY56 376 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 KHDC3LQ587J8 217 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 FAM3CQ92520 227 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 TOMM40LQ969M1 308 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 TSACCQ96A04 125 aaPredicted RBP10.79□□□□□ -0.68
VDR-208ENST00000550325 LRRC3BQ96PB8 259 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 OR5B2Q96R09 309 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 LRRK1Q38SD2 2015 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 HEXBP07686 556 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 OMGP23515 440 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 GJA4P35212 333 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 DHPSP49366 369 aaPredicted RBP10.79□□□□□ -0.68
VDR-208ENST00000550325 ZNF77Q15935 545 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 ZNF385CQ66K41 422 aaPredicted RBP10.79□□□□□ -0.68
VDR-208ENST00000550325 FAM166AQ6J272 317 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 GLIPR1L1Q6UWM5 242 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 PLXDC2Q6UX71 529 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 BCORP1Q8N888 145 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 POLR1DQ9Y2S0 133 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 TRBV6-7A0A0A0MS04 114 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 SMCO3A2RU48 225 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 SCDO00767 359 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 SOD3P08294 240 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 ZNF20P17024 532 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 RPS4XP62701 263 aaKnown RBP10.79□□□□□ -0.68
VDR-208ENST00000550325 NPSR1Q6W5P4 371 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 RNF144BQ7Z419 303 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 FAM160A2Q8N612 972 aaPredicted RBP10.79□□□□□ -0.68
VDR-208ENST00000550325 THOC3Q96J01 351 aaKnown RBP10.79□□□□□ -0.68
VDR-208ENST00000550325 ZFYVE21Q9BQ24 234 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 PRDM13Q9H4Q3 707 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 RFNGQ9Y644 331 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 FANCMQ8IYD8 2048 aa10.79□□□□□ -0.68
VDR-208ENST00000550325 CXorf51AA0A1B0GTR3 108 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 SCAF4O95104 1147 aaKnown RBP10.78□□□□□ -0.68
VDR-208ENST00000550325 CEACAM5P06731 702 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 CISD3P0C7P0 127 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 SLC6A9P48067 706 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 MGAT2Q10469 447 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 CHRFAM7AQ494W8 412 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 MED25Q71SY5 747 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 REEP6Q96HR9 211 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 PRRX2Q99811 253 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 FOXQ1Q9C009 403 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 FGF22Q9HCT0 170 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.78□□□□□ -0.68
VDR-208ENST00000550325 EML5Q05BV3 1969 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 OTOL1A6NHN0 477 aaPredicted RBP10.78□□□□□ -0.68
VDR-208ENST00000550325 DBX1A6NMT0 343 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 CDRT15L2A8MXV6 281 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 K7EQS6 105 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 AHSA1O95433 338 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 PNMTP11086 282 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 CSF2RAP15509 400 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 HIST1H1BP16401 226 aaKnown RBP10.78□□□□□ -0.68
VDR-208ENST00000550325 ZNF708P17019 499 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 ZNF93P35789 620 aaPredicted RBP10.78□□□□□ -0.68
VDR-208ENST00000550325 SLC35A1P78382 337 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 BTG2P78543 158 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 ZNF239Q16600 458 aaKnown RBP10.78□□□□□ -0.68
VDR-208ENST00000550325 FBXO46Q6PJ61 603 aaPredicted RBP10.78□□□□□ -0.68
VDR-208ENST00000550325 PATE1Q8WXA2 126 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 DGAT2Q96PD7 388 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 GDE1Q9NZC3 331 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 CA14Q9ULX7 337 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 GPR132Q9UNW8 380 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 RHBDD3Q9Y3P4 386 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 B3GALT1Q9Y5Z6 326 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms