RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 ST8SIA4Q92187 359 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 MARVELD1Q9BSK0 173 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 GSX2Q9BZM3 304 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 RGCCQ9H4X1 137 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 SHISA3A0PJX4 238 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 SERPINF1P36955 418 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 AGFG1P52594 562 aaKnown RBP13.37□□□□□ -0.27
CUX1-214ENST00000550008 PXDC1Q5TGL8 231 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 HSD17B11Q8NBQ5 300 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 OR5T1Q8NG75 326 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 OR10R2Q8NGX6 335 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 NUBPLQ8TB37 319 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 ARL11Q969Q4 196 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 FOXB1Q99853 325 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 CNTD2Q9H8S5 307 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 FANCFQ9NPI8 374 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 TMEM9BQ9NQ34 198 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 ST6GALNAC2Q9UJ37 374 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 VSTM5A8MXK1 200 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 BGLAPP02818 100 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 UBBP0CG47 229 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 RAB6AP20340 208 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 M6PRP20645 277 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 GALP22466 123 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 FKBP2P26885 142 aaKnown RBP13.37□□□□□ -0.27
CUX1-214ENST00000550008 EFNB2P52799 333 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 RRADP55042 308 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 RNLSQ5VYX0 342 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 BPHLQ86WA6 291 aaPredicted RBP13.37□□□□□ -0.27
CUX1-214ENST00000550008 CDC20BQ86Y33 519 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 OR51H1Q8NH63 302 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 APOBEC4Q8WW27 367 aaKnown RBP13.37□□□□□ -0.27
CUX1-214ENST00000550008 MESP1Q9BRJ9 268 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 TAS2R5Q9NYW4 299 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 DOCK7Q96N67 2140 aa13.37□□□□□ -0.27
CUX1-214ENST00000550008 A0A1W2PR77 199 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 PLSCR5A0PG75 271 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 LIPT2A6NK58 231 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 ADRB1P08588 477 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 C3AR1Q16581 482 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 ZNF709Q8N972 641 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 SCPEP1Q9HB40 452 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 B3GNT2Q9NY97 397 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 MYLKQ15746 1914 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 HLA-HP01893 362 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 HPXP02790 462 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 SLC6A1P30531 599 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 OR1C1Q15619 314 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 LILRB2Q8N423 598 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 TMEM217Q8N7C4 229 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 OR5M9Q8NGP3 310 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 SLC23A1Q9UHI7 598 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 PCNX1Q96RV3 2341 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 OR5H14A6NHG9 310 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 TIMM8AO60220 97 aaPredicted RBP13.36□□□□□ -0.27
CUX1-214ENST00000550008 SNAPC5O75971 98 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 ALX3O95076 343 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 ZNF32P17041 273 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 SELENOPP49908 381 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 EXOSC2Q13868 293 aaKnown RBP13.36□□□□□ -0.27
CUX1-214ENST00000550008 ZNF658BQ4V348 819 aaPredicted RBP13.36□□□□□ -0.27
CUX1-214ENST00000550008 SLC22A25Q6T423 547 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 OR2Y1Q8NGV0 311 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 OR10D3Q8NH80 312 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 FAM234AQ9H0X4 552 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 A0A1B0GUH1 482 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 MED6O75586 246 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 GIPP09681 153 aaPredicted RBP13.36□□□□□ -0.27
CUX1-214ENST00000550008 ACTBL2Q562R1 376 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 TMPRSS7Q7RTY8 843 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 ZNF687Q8N1G0 1237 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 ARHGAP5-AS1Q96IT6 56 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 ARPC5LQ9BPX5 153 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 PPP1R3EQ9H7J1 279 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 MOB1AQ9H8S9 216 aa13.36□□□□□ -0.27
CUX1-214ENST00000550008 A0A1W2PQM1 296 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 SCO1O75880 301 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 ZNF205O95201 554 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 OR3A4PP47883 348 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 OR52H1Q8NGJ2 320 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 MTFP1Q9UDX5 166 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 TSC2P49815 1807 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 COL6A6A6NMZ7 2263 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 MN1Q10571 1320 aaPredicted RBP13.35□□□□□ -0.27
CUX1-214ENST00000550008 TUBG1P23258 451 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 HAAOP46952 286 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 EDDM3AQ14507 147 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 AADACL3Q5VUY0 350 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 FBXL14Q8N1E6 418 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 BCO1Q9HAY6 547 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 MC2RQ01718 297 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 KISS1Q15726 138 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 PRSS42Q7Z5A4 293 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.35□□□□□ -0.27
CUX1-214ENST00000550008 PRSS35Q8N3Z0 413 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 ASB10Q8WXI3 467 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 S100PBPQ96BU1 408 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 ZNF275Q9NSD4 429 aaPredicted RBP13.35□□□□□ -0.27
CUX1-214ENST00000550008 ZMIZ1Q9ULJ6 1067 aa13.35□□□□□ -0.27
CUX1-214ENST00000550008 ST3GAL6Q9Y274 331 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms