RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 HYOU1Q9Y4L1 999 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 HEBP2Q9Y5Z4 205 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 COL5A1P20908 1838 aaPredicted RBP1.94□□□□□ -2.1
CCDC38-208ENST00000549876 IGHV3OR16-9A0A0B4J2B5 98 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 A0A0B4J2E0 115 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 ANKRD20A5PA0PJZ0 165 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 RNASEK-C17orf49H0YIS7 233 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 DFFAO00273 331 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 CDC40O60508 579 aaKnown RBP eCLIP1.93□□□□□ -2.1
CCDC38-208ENST00000549876 SLC16A7O60669 478 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 ALOX12BO75342 701 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 SC5DO75845 299 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 FADS2O95864 444 aaKnown RBP1.93□□□□□ -2.1
CCDC38-208ENST00000549876 GCGP01275 180 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 RPN2P04844 631 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 GLAP06280 429 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 EIF4EP06730 217 aaKnown RBP1.93□□□□□ -2.1
CCDC38-208ENST00000549876 NQO2P16083 231 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 ZNF30P17039 623 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 CNR1P21554 472 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 OMGP23515 440 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 IL12BP29460 328 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 CEACAM3P40198 252 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 PPICP45877 212 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 DNASE1L1P49184 302 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 ZNF138P52744 262 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 SLC7A9P82251 487 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 RPL18AQ02543 176 aaKnown RBP1.93□□□□□ -2.1
CCDC38-208ENST00000549876 SMARCB1Q12824 385 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 KIR2DS1Q14954 304 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 TNXAQ16473 311 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 RSPO1Q2MKA7 263 aaPredicted RBP1.93□□□□□ -2.1
CCDC38-208ENST00000549876 CPTPQ5TA50 214 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 FAHD1Q6P587 224 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 LYPD2Q6UXB3 125 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 CD300LGQ6UXG3 332 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 LRRC8AQ8IWT6 810 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 DAW1Q8N136 415 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 Q8N976 141 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 OR4D6Q8NGJ1 314 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 OR10Z1Q8NGY1 313 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 ACTRT1Q8TDG2 376 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 ZFP90Q8TF47 636 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 DNAJC19Q96DA6 116 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 DYNLL2Q96FJ2 89 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 RNF145Q96MT1 663 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 ZNF317Q96PQ6 595 aaPredicted RBP1.93□□□□□ -2.1
CCDC38-208ENST00000549876 TSNAXQ99598 290 aaKnown RBP1.93□□□□□ -2.1
CCDC38-208ENST00000549876 FRMD8P1Q9BZ68 369 aaPredicted RBP1.93□□□□□ -2.1
CCDC38-208ENST00000549876 CHRNA10Q9GZZ6 450 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 CDC42EP4Q9H3Q1 356 aaKnown RBP1.93□□□□□ -2.1
CCDC38-208ENST00000549876 SLCO1B3Q9NPD5 702 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 ZDHHC4Q9NPG8 344 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 FAM49BQ9NUQ9 324 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 RMND1Q9NWS8 449 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 VAPAQ9P0L0 249 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 SLC17A7Q9P2U7 560 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 CLEC2DQ9UHP7 191 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 CES1P1Q9UKY3 287 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 POFUT2Q9Y2G5 429 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 OR51B2Q9Y5P1 312 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 BRWD3Q6RI45 1802 aa1.93□□□□□ -2.1
CCDC38-208ENST00000549876 NFASCO94856 1347 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 A0A1B0GW15 77 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 SYCE1LA8MT33 242 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 SEC14L6B5MCN3 397 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 H7C1H1 209 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 H7C2Y5 167 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 H7C417 338 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 CD37P11049 281 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 PRPS2P11908 318 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 TCP1P17987 556 aaKnown RBP1.92□□□□□ -2.1
CCDC38-208ENST00000549876 RAB3AP20336 220 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 MYL9P24844 172 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 GNRHRP30968 328 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 ARL2P36404 184 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 CEACAM6P40199 344 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 CDKN2BP42772 138 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 RAB7AP51149 207 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 HCCSP53701 268 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 PPP1CBP62140 327 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 RPL31P62899 125 aaKnown RBP1.92□□□□□ -2.1
CCDC38-208ENST00000549876 PAFAH1B2P68402 229 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 HMGCS1Q01581 520 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 KDSRQ06136 332 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 ST3GAL4Q11206 333 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 MAD2L1BPQ15013 274 aaPredicted RBP1.92□□□□□ -2.1
CCDC38-208ENST00000549876 TAL2Q16559 108 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 POU2AF1Q16633 256 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 NDUFAF6Q330K2 333 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 FBXW12Q6X9E4 464 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 CDKL3Q8IVW4 592 aaPredicted RBP1.92□□□□□ -2.1
CCDC38-208ENST00000549876 C11orf72Q8NBR9 251 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 OR10AD1Q8NGE0 317 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 OR51A7Q8NH64 312 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 RGP1Q92546 391 aaPredicted RBP1.92□□□□□ -2.1
CCDC38-208ENST00000549876 NTAN1Q96AB6 310 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 WFIKKN1Q96NZ8 548 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 UQCC2Q9BRT2 126 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 UTP23Q9BRU9 249 aaKnown RBP1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms