RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 RTBDNQ9BSG5 229 aaPredicted RBP12.17□□□□□ -0.46
HDAC7-228ENST00000548938 TBL1XR1Q9BZK7 514 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 EGLN1Q9GZT9 426 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 NIT2Q9NQR4 276 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 CACFD1Q9UGQ2 172 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 A0A1W2PP11 408 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 A8MVM7 634 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 MFNGO00587 321 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 UBE2CO00762 179 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 TO15178 435 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 ZNF354AO60765 605 aaPredicted RBP12.17□□□□□ -0.46
HDAC7-228ENST00000548938 AHSA1O95433 338 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 S100A9P06702 114 aaKnown RBP12.17□□□□□ -0.46
HDAC7-228ENST00000548938 S100A6P06703 90 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 HOXB5P09067 269 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 ZNF93P35789 620 aaPredicted RBP12.17□□□□□ -0.46
HDAC7-228ENST00000548938 MMP16P51512 607 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 POLR2HP52434 150 aaKnown RBP12.17□□□□□ -0.46
HDAC7-228ENST00000548938 CLDN6P56747 220 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 VAX1Q5SQQ9 334 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 FIP1L1Q6UN15 594 aaKnown RBP12.17□□□□□ -0.46
HDAC7-228ENST00000548938 GPR119Q8TDV5 335 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 SECTM1Q8WVN6 248 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 RNF133Q8WVZ7 376 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 RAB3CQ96E17 227 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 C2orf50Q96LR7 162 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 BANF2Q9H503 90 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 ATXN7L1Q9ULK2 861 aaPredicted RBP12.17□□□□□ -0.46
HDAC7-228ENST00000548938 TCRBV21S2A2A0A5A6 115 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 H0YIG0 161 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 SCGNO76038 276 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 S100A8P05109 93 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 HIST1H1DP16402 221 aaKnown RBP12.17□□□□□ -0.46
HDAC7-228ENST00000548938 PAX6P26367 422 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 AKT2P31751 481 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 SULT1A2P50226 295 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 PCK2Q16822 640 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 OR2A2Q6IF42 318 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 GLIPR1L1Q6UWM5 242 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 Q6ZRG5 221 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 ARRDC1Q8N5I2 433 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 OR13G1Q8NGZ3 307 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 TCEAL3Q969E4 200 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 IER2Q9BTL4 223 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 PBOV1Q9GZY1 135 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 RPS10P5Q9NQ39 176 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 LANCL2Q9NS86 450 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 ANAPC10Q9UM13 185 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 RPH3AQ9Y2J0 694 aaPredicted RBP12.17□□□□□ -0.46
HDAC7-228ENST00000548938 TDRD6O60522 2096 aaKnown RBP12.16□□□□□ -0.46
HDAC7-228ENST00000548938 CEACAM18A8MTB9 384 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 SDCBPO00560 298 aaPredicted RBP12.16□□□□□ -0.46
HDAC7-228ENST00000548938 GABRG2P18507 467 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 FPR2P25090 351 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 GALNSP34059 522 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 GSK3AP49840 483 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 YPEL5P62699 121 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 PARP12Q9H0J9 701 aaKnown RBP12.16□□□□□ -0.46
HDAC7-228ENST00000548938 MED29Q9NX70 200 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 DNAJB11Q9UBS4 358 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 MMP17Q9ULZ9 603 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 TMEM131Q92545 1883 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 PMS2P1A4D2B8 440 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 A6NLC8 198 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 ALG1L2C9J202 215 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 DDAH2O95865 285 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 IGKV3-11P04433 115 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 SFTPBP07988 381 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 HKR1P10072 659 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 GLRA1P23415 457 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 OR3A4PP47883 348 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 P2RY4P51582 365 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 IL15RAQ13261 267 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 TMEM268Q5VZI3 342 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 EIF5AL1Q6IS14 154 aaKnown RBP12.16□□□□□ -0.46
HDAC7-228ENST00000548938 DEGS2Q6QHC5 323 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 PEG10Q86TG7 708 aaKnown RBP12.16□□□□□ -0.46
HDAC7-228ENST00000548938 OR5H2Q8NGV7 314 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 ASB10Q8WXI3 467 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 ISOC2Q96AB3 205 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 SLAMF6Q96DU3 332 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 C1orf147Q96MC9 270 aaPredicted RBP12.16□□□□□ -0.46
HDAC7-228ENST00000548938 NUDT16L1Q9BRJ7 211 aaKnown RBP12.16□□□□□ -0.46
HDAC7-228ENST00000548938 SOX7Q9BT81 388 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 ASH2LQ9UBL3 628 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 FBLN5Q9UBX5 448 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 MRPS28Q9Y2Q9 187 aaKnown RBP12.16□□□□□ -0.46
HDAC7-228ENST00000548938 TIMM10BQ9Y5J6 103 aa12.16□□□□□ -0.46
HDAC7-228ENST00000548938 PET100P0DJ07 73 aa12.15□□□□□ -0.46
HDAC7-228ENST00000548938 RPS2P15880 293 aaKnown RBP12.15□□□□□ -0.46
HDAC7-228ENST00000548938 DVL1P1P54792 670 aaPredicted RBP12.15□□□□□ -0.46
HDAC7-228ENST00000548938 TMEM50BP56557 158 aa12.15□□□□□ -0.46
HDAC7-228ENST00000548938 PLCXD2Q0VAA5 305 aa12.15□□□□□ -0.46
HDAC7-228ENST00000548938 FABP9Q0Z7S8 132 aa12.15□□□□□ -0.46
HDAC7-228ENST00000548938 AADACL3Q5VUY0 350 aa12.15□□□□□ -0.46
HDAC7-228ENST00000548938 Q6ZS52 159 aa12.15□□□□□ -0.46
HDAC7-228ENST00000548938 C9orf40Q8IXQ3 194 aa12.15□□□□□ -0.46
HDAC7-228ENST00000548938 OR5D14Q8NGL3 314 aa12.15□□□□□ -0.46
HDAC7-228ENST00000548938 OR51E1Q8TCB6 317 aa12.15□□□□□ -0.46
HDAC7-228ENST00000548938 ZNF721Q8TF20 911 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms