RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 GFI1Q99684 422 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 GPR174Q9BXC1 333 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 SMIM3Q9BZL3 60 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 CHST11Q9NPF2 352 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 USP36Q9P275 1121 aaKnown RBP7.04□□□□□ -1.28
UBR1-202ENST00000546274 ICAM5Q9UMF0 924 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 A0A0B4J2E0 115 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 TMEM269A0A1B0GVZ9 245 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 A0A1B0GX12 115 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 ZNF749O43361 778 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 FGF17O60258 216 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 SOX2P48431 317 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 TAS2R43P59537 309 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 IL13RA1P78552 427 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 NAAAQ02083 359 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 TCEA2Q15560 299 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 AMZ1Q400G9 498 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 RIPPLY2Q5TAB7 128 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 EIF5AL1Q6IS14 154 aaKnown RBP7.04□□□□□ -1.28
UBR1-202ENST00000546274 FAM131CQ96AQ9 280 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 PELI1Q96FA3 418 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 RCC1LQ96I51 464 aaKnown RBP7.04□□□□□ -1.28
UBR1-202ENST00000546274 APOOQ9BUR5 198 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 ADAP2Q9NPF8 381 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 GSKIPQ9P0R6 139 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 PILRAQ9UKJ1 303 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 TMED3Q9Y3Q3 217 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 V9GY05 133 aa7.04□□□□□ -1.28
UBR1-202ENST00000546274 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.03□□□□□ -1.28
UBR1-202ENST00000546274 A0A1W2PQU0 124 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 IFNL4K9M1U5 179 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 CTNSO60931 367 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 GGCTO75223 188 aaKnown RBP7.03□□□□□ -1.28
UBR1-202ENST00000546274 GLSO94925 669 aaPredicted RBP7.03□□□□□ -1.28
UBR1-202ENST00000546274 ADH1BP00325 375 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 AKR1C4P17516 323 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 EPHA1P21709 976 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 EDNRAP25101 427 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 BRS3P32247 399 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 FHITP49789 147 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 NPY4RP50391 375 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 DCAF7P61962 342 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 RPS21P63220 83 aaKnown RBP7.03□□□□□ -1.28
UBR1-202ENST00000546274 EXOSC7Q15024 291 aaKnown RBP7.03□□□□□ -1.28
UBR1-202ENST00000546274 PRICKLE4Q2TBC4 344 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 TMPRSS12Q86WS5 348 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 MRPL41Q8IXM3 137 aaKnown RBP7.03□□□□□ -1.28
UBR1-202ENST00000546274 OR4S1Q8NGB4 309 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 GRHL3Q8TE85 626 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 SMIM19Q96E16 107 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 WFIKKN1Q96NZ8 548 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 OR5B2Q96R09 309 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 TNFRSF13CQ96RJ3 184 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 CNN2Q99439 309 aaKnown RBP7.03□□□□□ -1.28
UBR1-202ENST00000546274 CDX2Q99626 313 aaPredicted RBP7.03□□□□□ -1.28
UBR1-202ENST00000546274 SLC17A9Q9BYT1 436 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 ADAM19Q9H013 955 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 CDV3Q9UKY7 258 aaKnown RBP7.03□□□□□ -1.28
UBR1-202ENST00000546274 RANBP2P49792 3224 aaKnown RBP7.03□□□□□ -1.28
UBR1-202ENST00000546274 PRSS38A1L453 326 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 ZNF860A6NHJ4 632 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 FAM171A2A8MVW0 826 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 CCL25O15444 150 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 ZNF354AO60765 605 aaPredicted RBP7.03□□□□□ -1.28
UBR1-202ENST00000546274 RAB40ALP0C0E4 278 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 ZNF28P17035 718 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 AK4P27144 223 aaPredicted RBP7.03□□□□□ -1.28
UBR1-202ENST00000546274 PPP1R1AQ13522 171 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 CDK5R1Q15078 307 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 SLC22A25Q6T423 547 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 DGAT2L6Q6ZPD8 337 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 ADPRHL1Q8NDY3 354 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 OR51L1Q8NGJ5 315 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 CCL4L1Q8NHW4 92 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 SLC2A12Q8TD20 617 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 RAB40AQ8WXH6 277 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 RNF166Q96A37 237 aaPredicted RBP7.03□□□□□ -1.28
UBR1-202ENST00000546274 GUCD1Q96NT3 240 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 STACQ99469 402 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 PLA2G2FQ9BZM2 168 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 ACTR3CQ9C0K3 210 aaPredicted RBP7.03□□□□□ -1.28
UBR1-202ENST00000546274 KCNK15Q9H427 330 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 METTL8Q9H825 291 aaKnown RBP7.03□□□□□ -1.28
UBR1-202ENST00000546274 ZMAT3Q9HA38 289 aaKnown RBP7.03□□□□□ -1.28
UBR1-202ENST00000546274 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.03□□□□□ -1.28
UBR1-202ENST00000546274 TAS2R8Q9NYW2 309 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 SERTAD3Q9UJW9 196 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 HSF4Q9ULV5 492 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 MED31Q9Y3C7 131 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 V9GYS6 101 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 VCANP13611 3396 aa7.03□□□□□ -1.28
UBR1-202ENST00000546274 RIIAD1A6NNX1 92 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 H0YIZ8 118 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 M0QZ24 198 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 CYR61O00622 381 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 ATXN7O15265 892 aaPredicted RBP7.02□□□□□ -1.28
UBR1-202ENST00000546274 TNFSF14O43557 240 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 ITGB2P05107 769 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 SLC35G6P0C7Q6 338 aa7.02□□□□□ -1.28
UBR1-202ENST00000546274 LAMP2P13473 410 aa7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms