RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 ZNF671Q8TAW3 534 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 HAVCR2Q8TDQ0 301 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 SPSB4Q96A44 273 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 ZMYND19Q96E35 227 aaPredicted RBP4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 DUS3LQ96G46 650 aaKnown RBP4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 Q96MT0 163 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 CNN2Q99439 309 aaKnown RBP4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 DDOQ99489 341 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 TEAD3Q99594 435 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 SOX7Q9BT81 388 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 C9orf16Q9BUW7 83 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 ABHD6Q9BV23 337 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 ADI1Q9BV57 179 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 RTL8AQ9BWD3 113 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 SSBP3Q9BWW4 388 aaPredicted RBP4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 C7orf69Q9H7B7 122 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 ZMAT3Q9HA38 289 aaKnown RBP4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 PATZ1Q9HBE1 687 aaKnown RBP4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 C8orf4Q9NR00 106 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 MRPL22Q9NWU5 206 aaKnown RBP4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 DNAJB11Q9UBS4 358 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 CLN8Q9UBY8 286 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 IKZF2Q9UKS7 526 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 POLR3KQ9Y2Y1 108 aaPredicted RBP4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 AUP1Q9Y679 476 aa4.74□□□□□ -1.65
CLSTN3-215ENST00000544584 A0A0U1RQV5 110 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 ZNF816-ZNF321PA0A0X1KG74 233 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 A0A1W2PPH5 198 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 NKX6-3A6NJ46 265 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 FAM183AA6NL82 134 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 DHRS7CA6NNS2 312 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 F5H5P2 479 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 TRIM77I1YAP6 450 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 PLPP2O43688 288 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 ENSAO43768 121 aaKnown RBP4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 GPANK1O95872 356 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 KRT8P05787 483 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 OCM2P0CE71 109 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 OCMP0CE72 109 aaPredicted RBP4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 PRKACGP22612 351 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 CA6P23280 308 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 OPRL1P41146 370 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 MTNR1AP48039 350 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 MMP16P51512 607 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 ZNF121P58317 390 aaPredicted RBP4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 PSMA6P60900 246 aaKnown RBP4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 ACTC1P68032 377 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 ACTA1P68133 377 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 ZNF92Q03936 586 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 KRTAP1-1Q07627 177 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 RIPPLY1Q0D2K3 151 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 MED21Q13503 144 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 APOFQ13790 326 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 ZNF362Q5T0B9 420 aaPredicted RBP4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 KDM4DQ6B0I6 523 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 PLEKHG7Q6ZR37 379 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 DCDC5Q6ZRR9 648 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 KCTD8Q6ZWB6 473 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 FAM57BQ71RH2 274 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 SPATC1Q76KD6 591 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 MOGAT3Q86VF5 341 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 CMTM4Q8IZR5 234 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 IQCF1Q8N6M8 205 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 PNLDC1Q8NA58 520 aaKnown RBP4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 SEMA6DQ8NFY4 1073 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 OR10AD1Q8NGE0 317 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 OR4Q3Q8NH05 313 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 TMEM163Q8TC26 289 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 UTP4Q969X6 686 aaKnown RBP4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 C12orf43Q96C57 262 aaKnown RBP4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 NEIL1Q96FI4 390 aaPredicted RBP4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 MED30Q96HR3 178 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 MAP6Q96JE9 813 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 DMRTB1Q96MA1 342 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 TECTBQ96PL2 329 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 IL4I1Q96RQ9 567 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 PAPOLGQ9BWT3 736 aaKnown RBP4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 VCXQ9H320 206 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 METTL17Q9H7H0 456 aaPredicted RBP4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 RNPEPL1Q9HAU8 725 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 PLEKHA1Q9HB21 404 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 LPAR2Q9HBW0 351 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 PNRC2Q9NPJ4 139 aaKnown RBP4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 CLN6Q9NWW5 311 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 HAO2Q9NYQ3 351 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 DNAJC27Q9NZQ0 273 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 ENPP5Q9UJA9 477 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 GTF2A1LQ9UNN4 478 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 SNX5Q9Y5X3 404 aa4.73□□□□□ -1.65
CLSTN3-215ENST00000544584 WNK2Q9Y3S1 2297 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 LOC105371242A0A075B767 164 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 A0A1B0GWJ7 208 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 hCG_1809904A0A1W2PP81 198 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 A0A1W2PPE2 198 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 A0A1W2PR64 198 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 A0A1W2PRV1 198 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 IRGMA1A4Y4 181 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 OOEPA6NGQ2 149 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 H3BUI4 141 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 LGALS8O00214 317 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms