RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 B4GALT1P15291 398 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 DUSP8Q13202 625 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 CXorf67Q86X51 503 aaPredicted RBP13.97□□□□□ -0.17
CHD4-210ENST00000544040 SIRT3Q9NTG7 399 aaPredicted RBP13.97□□□□□ -0.17
CHD4-210ENST00000544040 OTUD1Q5VV17 481 aaPredicted RBP13.97□□□□□ -0.17
CHD4-210ENST00000544040 TGIF2LXQ8IUE1 241 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 SH2D7A6NKC9 451 aaPredicted RBP13.97□□□□□ -0.17
CHD4-210ENST00000544040 TMPRSS13Q9BYE2 586 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 ZNF142P52746 1687 aaPredicted RBP13.96□□□□□ -0.17
CHD4-210ENST00000544040 CTSLP07711 333 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 FAM3AP98173 230 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 GALNT16Q8N428 558 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 HGDQ93099 445 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 CIB3Q96Q77 187 aaPredicted RBP13.96□□□□□ -0.17
CHD4-210ENST00000544040 FGF22Q9HCT0 170 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 THAP10Q9P2Z0 257 aaPredicted RBP13.96□□□□□ -0.17
CHD4-210ENST00000544040 NCBP2LA6PVI3 153 aaKnown RBP13.96□□□□□ -0.17
CHD4-210ENST00000544040 PTHLHP12272 177 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 NKAIN1Q4KMZ8 207 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 AGBL4Q5VU57 503 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 ROBO4Q8WZ75 1007 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 FOXQ1Q9C009 403 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 A4GNTQ9UNA3 340 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 TEX50A0A1B0GTY4 177 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 DUS4LO95620 317 aaKnown RBP13.96□□□□□ -0.17
CHD4-210ENST00000544040 AQP6Q13520 282 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 SPINK9Q5DT21 86 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 SPNS3Q6ZMD2 512 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 OSR2Q8N2R0 312 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 IFT22Q9H7X7 185 aa13.96□□□□□ -0.17
CHD4-210ENST00000544040 RPS23P62266 143 aaKnown RBP13.96□□□□□ -0.18
CHD4-210ENST00000544040 C11orf91Q3C1V1 193 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 OR1N1Q8NGS0 311 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 LAT2Q9GZY6 243 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 C6orf106Q9H6K1 298 aaPredicted RBP13.96□□□□□ -0.18
CHD4-210ENST00000544040 HMX2A2RU54 273 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 CXCL13O43927 109 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 GPANK1O95872 356 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 OPN1MWP04001 364 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 OPN1MW2P0DN77 364 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 OPN1MW3P0DN78 364 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 ZBTB25P24278 435 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 TMPRSS11FQ6ZWK6 438 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 PLPP6Q8IY26 295 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 RSRP1Q9BUV0 290 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 ZDHHC5Q9C0B5 715 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 NAT8BQ9UHF3 227 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 PROCRQ9UNN8 238 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 MMP24Q9Y5R2 645 aa13.96□□□□□ -0.18
CHD4-210ENST00000544040 OR5AL1P0C617 328 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 SHBQ15464 509 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 GGNBP1Q5YKI7 109 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 C11orf87Q6NUJ2 197 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 NUDT9Q9BW91 350 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 AKIP1Q9NQ31 210 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 CRXO43186 299 aaPredicted RBP13.95□□□□□ -0.18
CHD4-210ENST00000544040 MYOGP15173 224 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 FAHP16930 419 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 GUK1Q16774 197 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 MOB3BQ86TA1 216 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 MYPOPQ86VE0 399 aaPredicted RBP13.95□□□□□ -0.18
CHD4-210ENST00000544040 MARCH5Q9NX47 278 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.95□□□□□ -0.18
CHD4-210ENST00000544040 POM121BA6NF01 834 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 CD22P20273 847 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 PAX5Q02548 391 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 CDC20Q12834 499 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 LSRQ86X29 649 aaPredicted RBP13.95□□□□□ -0.18
CHD4-210ENST00000544040 HES7Q9BYE0 225 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 IL5P05113 134 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 CLDN15P56746 228 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 PMS2P11Q13670 270 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 STUMQ69YW2 141 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 B3GNT9Q6UX72 402 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 NAGKQ9UJ70 344 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 NALCNQ8IZF0 1738 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 RNF224P0DH78 156 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 EPHA2P29317 976 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 GNG10P50151 68 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 IL10RAQ13651 578 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 IQCJQ1A5X6 159 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 FFAR4Q5NUL3 377 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 IL22RA2Q969J5 263 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 POM121Q96HA1 1249 aa13.95□□□□□ -0.18
CHD4-210ENST00000544040 ARFGEF2Q9Y6D5 1785 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 LRRC3CA6NJW4 275 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 ZP3P21754 424 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 LIMK1P53667 647 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 LDLRAD1Q5T700 205 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 ZBTB37Q5TC79 503 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 CA13Q8N1Q1 262 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 C17orf78Q8N4C9 275 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 BLNKQ8WV28 456 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 OXGR1Q96P68 337 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 CHRDL1Q9BU40 450 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 TNFRSF12AQ9NP84 129 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 SLC2A9Q9NRM0 540 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 ADAMTS5Q9UNA0 930 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 PMS2P1A4D2B8 440 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 EPXP11678 715 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms