RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-219	ENST00000543660	CPEB3	Q8NE35	698 aa	Known RBP	3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	SLC30A7	Q8NEW0	376 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	GJC3	Q8NFK1	279 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	OR7A2P	Q8NGA2	310 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	OR5AK3P	Q8NH89	298 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	TRMT10A	Q8TBZ6	339 aa	Known RBP	3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	FBXO25	Q8TCJ0	367 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	SFXN5	Q8TD22	340 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	OR5P2	Q8WZ92	322 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	RNF183	Q96D59	192 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	THOC1	Q96FV9	657 aa	Known RBP	3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	C7orf34	Q96L11	122 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	SIGLEC11	Q96RL6	698 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	FEV	Q99581	238 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	SSBP3	Q9BWW4	388 aa	Predicted RBP	3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	TAPBPL	Q9BX59	468 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	OR51B6	Q9H340	312 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	ZCCHC4	Q9H5U6	513 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	TMEM165	Q9HC07	324 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	RRAGD	Q9NQL2	400 aa	Predicted RBP	3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	TMEM106B	Q9NUM4	274 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	C1orf109	Q9NX04	203 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	VSX1	Q9NZR4	365 aa	Predicted RBP	3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	NLK	Q9UBE8	527 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	FBXL3	Q9UKT7	428 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	SNX12	Q9UMY4	172 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	LSM4	Q9Y4Z0	139 aa	Known RBP	3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	SIRT4	Q9Y6E7	314 aa	Predicted RBP	3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	TANC2	Q9HCD6	1990 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	STARD9	Q9P2P6	4700 aa		3.99	□□□□□ -1.77
NPIPB4-219	ENST00000543660	HUWE1	Q7Z6Z7	4374 aa	Known RBP	3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	LOC100506127	A0A0U1RQW1	187 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	POC1B-GALNT4	F8VUJ3	575 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	FZD7	O75084	574 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	UBL3	O95164	117 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	SNAP29	O95721	258 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	IGLL1	P15814	213 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	PRKACA	P17612	351 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	CXCR1	P25024	350 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	AZGP1	P25311	298 aa	Known RBP	3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	CD1B	P29016	333 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	MPV17	P39210	176 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	MDH2	P40926	338 aa	Known RBP	3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	EFNB2	P52799	333 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	MTCP1	P56278	107 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	KRTAP10-11	P60412	298 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	HBA1	P69905	142 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	EGR4	Q05215	589 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	FUT5	Q11128	374 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	PMS2P3	Q13401	168 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	CHI3L2	Q15782	390 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	UAP1	Q16222	522 aa	Predicted RBP	3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660		Q3ZCU0	254 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	FAM153C	Q494X1	144 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	SPDYE7P	Q495Y7	208 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	C1orf140	Q5VVS0	124 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	NCR3LG1	Q68D85	454 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	SLC35E4	Q6ICL7	350 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	PRR27	Q6MZM9	219 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	CD164L2	Q6UWJ8	174 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	FRRS1	Q6ZNA5	592 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	C16orf62	Q7Z3J2	963 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	C6orf120	Q7Z4R8	191 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	IGFN1	Q86VF2	1251 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	ANKRD46	Q86W74	232 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	SKA3	Q8IX90	412 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	CADM3	Q8N126	398 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	LYG1	Q8N1E2	194 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	CLEC4F	Q8N1N0	589 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	WFDC9	Q8NEX5	89 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	NUDT10	Q8NFP7	164 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	BPIFC	Q8NFQ6	507 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	OR2T11	Q8NH01	316 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	MFSD8	Q8NHS3	518 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	ABHD4	Q8TB40	342 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	WIPF2	Q8TF74	440 aa	Predicted RBP	3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	TSEN15	Q8WW01	171 aa	Known RBP	3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	L3HYPDH	Q96EM0	354 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	NUDT11	Q96G61	164 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	LRR1	Q96L50	414 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	OXGR1	Q96P68	337 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	PRR25	Q96S07	402 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	BCL2L14	Q9BZR8	327 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	EGLN1	Q9GZT9	426 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	MMP28	Q9H239	520 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	RAD21L1	Q9H4I0	556 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	NANOG	Q9H9S0	305 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	MEAF6	Q9HAF1	191 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	GPR173	Q9NS66	373 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	ACOXL	Q9NUZ1	547 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	CNOT2	Q9NZN8	540 aa	Known RBP	3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	OR14J1	Q9UGF5	321 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	FOXJ3	Q9UPW0	622 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	POFUT2	Q9Y2G5	429 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	SIGLEC9	Q9Y336	463 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	SH3GLB1	Q9Y371	365 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	WDR45	Q9Y484	360 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660		V9GYY5	206 aa	Predicted RBP	3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	FRAS1	Q86XX4	4008 aa		3.98	□□□□□ -1.77
NPIPB4-219	ENST00000543660	TRGV11	A0A075B6L2	103 aa		3.97	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms