RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 SLC2A1P11166 492 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 CALB2P22676 271 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 GNALP38405 381 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 PDCD1Q15116 288 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 SFRP4Q6FHJ7 346 aaPredicted RBP10.91□□□□□ -0.66
RTN3-213ENST00000543552 C16orf87Q6PH81 154 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 CD300LDQ6UXZ3 194 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 SPATC1Q76KD6 591 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 SHFQ7M4L6 423 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 ERI1Q8IV48 349 aaKnown RBP10.91□□□□□ -0.66
RTN3-213ENST00000543552 C19orf18Q8NEA5 215 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 CSNK2A3Q8NEV1 391 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 OR10G2Q8NGC3 310 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 OR4Q3Q8NH05 313 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 ZNRF4Q8WWF5 429 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 GATAD2BQ8WXI9 593 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 NSL1Q96IY1 281 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 FAM71F1Q96KD3 344 aaPredicted RBP10.91□□□□□ -0.66
RTN3-213ENST00000543552 PCGF1Q9BSM1 259 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 OR10A2Q9H208 303 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 RGCCQ9H4X1 137 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 ABCB9Q9NP78 766 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 TRRAPQ9Y4A5 3859 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 ANXA2P2A6NMY6 339 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 SRRM5B3KS81 715 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 HOXA3O43365 443 aaPredicted RBP10.9□□□□□ -0.66
RTN3-213ENST00000543552 CRYBA1P05813 215 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 MUC1P15941 1255 aaPredicted RBP10.9□□□□□ -0.66
RTN3-213ENST00000543552 GSTT1P30711 240 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 CFHR2P36980 270 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 NAA10P41227 235 aaPredicted RBP10.9□□□□□ -0.66
RTN3-213ENST00000543552 MICBQ29980 383 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 BRD3OSQ6XYD6 125 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 SLC16A9Q7RTY1 509 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 DPY19L4Q7Z388 723 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.9□□□□□ -0.66
RTN3-213ENST00000543552 TMEM86BQ8N661 226 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 OR6N2Q8NGY6 317 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 RNF133Q8WVZ7 376 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 OTULINQ96BN8 352 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 ASB9Q96DX5 294 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 REEP6Q96HR9 211 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 TEX12Q9BXU0 123 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 SLITRK2Q9H156 845 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 PRDM13Q9H4Q3 707 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 MARCH7Q9H992 704 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 RNPEPL1Q9HAU8 725 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 CTSZQ9UBR2 303 aa10.9□□□□□ -0.66
RTN3-213ENST00000543552 GLCEO94923 617 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 GYPAP02724 150 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 H2BFMP0C1H6 154 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 CLUP10909 449 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 PSKH1P11801 424 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 GYS2P54840 703 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 RPL15P61313 204 aaKnown RBP10.89□□□□□ -0.67
RTN3-213ENST00000543552 FAM3AP98173 230 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 IL5RAQ01344 420 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 PPP1R8Q12972 351 aaKnown RBP10.89□□□□□ -0.67
RTN3-213ENST00000543552 DEFB112Q30KQ8 113 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 TEX36Q5VZQ5 186 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 SLC36A1Q7Z2H8 476 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 GCSAMQ8N6F7 178 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 ZNF454Q8N9F8 522 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 OR4F5Q8NH21 305 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 GIPC3Q8TF64 312 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 SSMEM1Q8WWF3 244 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 TMIGD2Q96BF3 282 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 C12orf43Q96C57 262 aaKnown RBP10.89□□□□□ -0.67
RTN3-213ENST00000543552 CCDC124Q96CT7 223 aaKnown RBP10.89□□□□□ -0.67
RTN3-213ENST00000543552 PGAM5Q96HS1 289 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 WDFY2Q96P53 400 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 FEVQ99581 238 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 MICU1Q9BPX6 476 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 ABHD6Q9BV23 337 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 PAPOLGQ9BWT3 736 aaKnown RBP10.89□□□□□ -0.67
RTN3-213ENST00000543552 ZNF556Q9HAH1 456 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 KAAG1Q9UBP8 84 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 ZNF391Q9UJN7 358 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 POMT1Q9Y6A1 747 aa10.89□□□□□ -0.67
RTN3-213ENST00000543552 hCG_38984A0A1B0GV85 526 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 MDFIC2A0A1B0GVS7 189 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 PRR23D1E9PI22 279 aaPredicted RBP10.88□□□□□ -0.67
RTN3-213ENST00000543552 GNGT2O14610 69 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 TNFRSF13BO14836 293 aaPredicted RBP10.88□□□□□ -0.67
RTN3-213ENST00000543552 GPR37O15354 613 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 CST1P01037 141 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 LHBP01229 141 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 SFTPBP07988 381 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 PRR23D2P0DMB1 279 aaPredicted RBP10.88□□□□□ -0.67
RTN3-213ENST00000543552 OPRL1P41146 370 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 GSK3AP49840 483 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 ZNF121P58317 390 aaPredicted RBP10.88□□□□□ -0.67
RTN3-213ENST00000543552 GFOD2Q3B7J2 385 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 LINC01590Q5TEZ4 76 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 ZNF826PQ6ZT77 177 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 FAM57BQ71RH2 274 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 FAM90A1Q86YD7 464 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 CMTM4Q8IZR5 234 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 CCDC197Q8NCU1 140 aa10.88□□□□□ -0.67
RTN3-213ENST00000543552 TBC1D15Q8TC07 691 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms