RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 GSX2Q9BZM3 304 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 COMMD4Q9H0A8 199 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 ISYNA1Q9NPH2 558 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 GPR84Q9NQS5 396 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 TMEM100Q9NV29 134 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 PAK1IP1Q9NWT1 392 aaPredicted RBP10.41□□□□□ -0.74
DDX55-210ENST00000543016 FRRS1LQ9P0K9 344 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 ERVK-18Q9QC07 812 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 FZR1Q9UM11 496 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 TRIM64A6NGJ6 449 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 OR4C45A6NMZ5 311 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 ANKRD30BLA7E2S9 258 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 OGG1O15527 345 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 SYT7O43581 403 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 TNFAIP8O95379 198 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 ADRA2AP08913 450 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 ACHEP22303 614 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 PSMB10P40306 273 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 ZNF81P51508 661 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 CHN2P52757 468 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 RIPPLY1Q0D2K3 151 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 GPR50Q13585 617 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 CDK5R1Q15078 307 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 TBCEQ15813 527 aaPredicted RBP10.4□□□□□ -0.74
DDX55-210ENST00000543016 DEFB113Q30KQ7 82 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 OR2G6Q5TZ20 316 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 COMMD2Q86X83 199 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 PRSS35Q8N3Z0 413 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 SEMA6DQ8NFY4 1073 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 OR51E1Q8TCB6 317 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 RPS4Y2Q8TD47 263 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 GATAD2BQ8WXI9 593 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 SLC30A2Q9BRI3 323 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 CCDC90BQ9GZT6 254 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 EGLN1Q9GZT9 426 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 MYOZ1Q9NP98 299 aaPredicted RBP10.4□□□□□ -0.74
DDX55-210ENST00000543016 MYEF2Q9P2K5 600 aaKnown RBP10.4□□□□□ -0.74
DDX55-210ENST00000543016 HHLA2Q9UM44 414 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 PLEKHA6Q9Y2H5 1048 aa10.4□□□□□ -0.74
DDX55-210ENST00000543016 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.39□□□□□ -0.75
DDX55-210ENST00000543016 TRBV2A0A0J9YWF9 115 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 ZNF816-ZNF321PA0A0X1KG74 233 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 A0A1B0GTI1 187 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 C5orf63A6NC05 138 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 GMDSO60547 372 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 CST4P01036 141 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 MT-ND2P03891 347 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 CD55P08174 381 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 GNALP38405 381 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 ALDH3B1P43353 468 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 KIR3DL2P43630 455 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 EFNA4P52798 201 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 NANOS3P60323 173 aaKnown RBP10.39□□□□□ -0.75
DDX55-210ENST00000543016 MRPS11P82912 194 aaKnown RBP10.39□□□□□ -0.75
DDX55-210ENST00000543016 GFOD2Q3B7J2 385 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 CELF2-AS1Q8N7Q2 184 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 ZNF676Q8N7Q3 588 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 OR56B2PQ8NGI1 322 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 OR5AK2Q8NH90 309 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 FCGR1BQ92637 280 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 THRSPQ92748 146 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 SMIM19Q96E16 107 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 LYZL4Q96KX0 146 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 TECTBQ96PL2 329 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 NR1H4Q96RI1 486 aaPredicted RBP10.39□□□□□ -0.75
DDX55-210ENST00000543016 VRK1Q99986 396 aaPredicted RBP10.39□□□□□ -0.75
DDX55-210ENST00000543016 LIME1Q9H400 295 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 ENPP5Q9UJA9 477 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 MPC1Q9Y5U8 109 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 V9GYS6 101 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 ARFGEF3Q5TH69 2177 aa10.39□□□□□ -0.75
DDX55-210ENST00000543016 ARID1AO14497 2285 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 USF3Q68DE3 2245 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 E9PI62 339 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 P2RY10O00398 339 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 PLPP2O43688 288 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 ZFPL1O95159 310 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 F12P00748 615 aaPredicted RBP10.38□□□□□ -0.75
DDX55-210ENST00000543016 SERPINA3P01011 423 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 TNFRSF1AP19438 455 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 CDH15P55291 814 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 MED22Q15528 200 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 TESK1Q15569 626 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 ALKBH6Q3KRA9 238 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 DMKNQ6E0U4 476 aaPredicted RBP10.38□□□□□ -0.75
DDX55-210ENST00000543016 ZNF773Q6PK81 442 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 PRSS57Q6UWY2 283 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 ZNF367Q7RTV3 350 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 OR14K1Q8NGZ2 314 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 NRGNQ92686 78 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 PPP1R14AQ96A00 147 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 FAM71F1Q96KD3 344 aaPredicted RBP10.38□□□□□ -0.75
DDX55-210ENST00000543016 FOXC2Q99958 501 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 DECR2Q9NUI1 292 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 IL19Q9UHD0 177 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 ZNF281Q9Y2X9 895 aa10.38□□□□□ -0.75
DDX55-210ENST00000543016 LSM2Q9Y333 95 aaKnown RBP10.38□□□□□ -0.75
DDX55-210ENST00000543016 LOC107986453A0A1B0GWG9 222 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 ZSCAN5BA6NJL1 495 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 ANXA2P2A6NMY6 339 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms