RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 OR6C65A6NJZ3 312 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 F5H0A9 414 aaPredicted RBP8.98□□□□□ -0.97
TOP3A-208ENST00000542570 CA6P23280 308 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 DOC2BQ14184 412 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 HLXQ14774 488 aaPredicted RBP8.98□□□□□ -0.97
TOP3A-208ENST00000542570 DOK3Q7L591 496 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 GPR155Q7Z3F1 870 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 TRAPPC2LQ9UL33 140 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 PROCRQ9UNN8 238 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 CCDC168Q8NDH2 2452 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 WDFY4Q6ZS81 3184 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 A0A1W2PP11 408 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 POM121CA8CG34 1229 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 SIRPB1O00241 398 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 PRKACAP17612 351 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 RPS4Y1P22090 263 aaKnown RBP8.98□□□□□ -0.97
TOP3A-208ENST00000542570 CREB3L2Q70SY1 520 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 ADGRE4PQ86SQ3 457 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 DRAXINQ8NBI3 349 aaPredicted RBP8.98□□□□□ -0.97
TOP3A-208ENST00000542570 OR8B12Q8NGG6 310 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 RNF128Q8TEB7 428 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 KCTD12Q96CX2 325 aaKnown RBP8.98□□□□□ -0.97
TOP3A-208ENST00000542570 ELMOD3Q96FG2 381 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 TRAV39A0A0B4J263 110 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 FAM90A27PA6NNH2 459 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 NPIPB9F8W1W9 429 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 IRF2P14316 349 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 ACP1P24666 158 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 MST1P26927 711 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 FAM189A2Q15884 450 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 CDONQ4KMG0 1287 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 DMKNQ6E0U4 476 aaPredicted RBP8.98□□□□□ -0.97
TOP3A-208ENST00000542570 MRPL14Q6P1L8 145 aaKnown RBP8.98□□□□□ -0.97
TOP3A-208ENST00000542570 FAM219AQ8IW50 185 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 GVQW1Q8N7I0 195 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 OR52B4Q8NGK2 314 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 TAS2R8Q9NYW2 309 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 OR5V1Q9UGF6 321 aa8.98□□□□□ -0.97
TOP3A-208ENST00000542570 FIGNL2A6NMB9 653 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 CDX4O14627 284 aaPredicted RBP8.97□□□□□ -0.97
TOP3A-208ENST00000542570 CDC14BO60729 498 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 DIRAS3O95661 229 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 FKBP2P26885 142 aaKnown RBP8.97□□□□□ -0.97
TOP3A-208ENST00000542570 VAMP2P63027 116 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 IFITM3Q01628 133 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 TBC1D28Q2M2D7 210 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 UNQ6126/PRO20091Q6UXV3 157 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 C17orf82Q86X59 251 aaPredicted RBP8.97□□□□□ -0.97
TOP3A-208ENST00000542570 FBXL14Q8N1E6 418 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 SLC43A2Q8N370 569 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 FGF11Q92914 225 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 TMPRSS13Q9BYE2 586 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 SRRQ9GZT4 340 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 SIAEQ9HAT2 523 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 CHCHD2Q9Y6H1 151 aaPredicted RBP8.97□□□□□ -0.97
TOP3A-208ENST00000542570 GTF3C1Q12789 2109 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 OR4C45A6NMZ5 311 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 ZNF732B4DXR9 585 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 ZNF254O75437 659 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 OR3A4PP47883 348 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 RBPJQ06330 500 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 SF3B4Q15427 424 aaKnown RBP eCLIP8.97□□□□□ -0.97
TOP3A-208ENST00000542570 OR2B11Q5JQS5 317 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 Q6ZNX1 250 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 FJX1Q86VR8 437 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 DND1Q8IYX4 353 aaKnown RBP8.97□□□□□ -0.97
TOP3A-208ENST00000542570 SUMF1Q8NBK3 374 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 FOXRED1Q96CU9 486 aaPredicted RBP8.97□□□□□ -0.97
TOP3A-208ENST00000542570 LOXL4Q96JB6 756 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 ZC3H10Q96K80 434 aaKnown RBP8.97□□□□□ -0.97
TOP3A-208ENST00000542570 SOX7Q9BT81 388 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 SRXN1Q9BYN0 137 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 KCNN3Q9UGI6 736 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 CSAG2Q9Y5P2 127 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 PLCE1Q9P212 2302 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 SPDEFO95238 335 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 SLC34A2O95436 690 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 KIR2DL3P43628 341 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 CSRP2Q16527 193 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 GSG1Q2KHT4 349 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 ZBTB44Q8NCP5 570 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 NFAM1Q8NET5 270 aaPredicted RBP8.97□□□□□ -0.97
TOP3A-208ENST00000542570 EMG1Q92979 244 aaKnown RBP8.97□□□□□ -0.97
TOP3A-208ENST00000542570 KISS1RQ969F8 398 aaPredicted RBP8.97□□□□□ -0.97
TOP3A-208ENST00000542570 ZNF700Q9H0M5 742 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 MRPL22Q9NWU5 206 aaKnown RBP8.97□□□□□ -0.97
TOP3A-208ENST00000542570 ZMIZ1Q9ULJ6 1067 aa8.97□□□□□ -0.97
TOP3A-208ENST00000542570 A0A1B0GW55 424 aa8.96□□□□□ -0.97
TOP3A-208ENST00000542570 AQP7P3A6NL99 342 aa8.96□□□□□ -0.97
TOP3A-208ENST00000542570 MCRIP1C9JLW8 97 aa8.96□□□□□ -0.97
TOP3A-208ENST00000542570 AKR7A2O43488 359 aa8.96□□□□□ -0.97
TOP3A-208ENST00000542570 SPRY3O43610 288 aa8.96□□□□□ -0.97
TOP3A-208ENST00000542570 DXOO77932 396 aaKnown RBP8.96□□□□□ -0.97
TOP3A-208ENST00000542570 CRYAAP02489 173 aa8.96□□□□□ -0.97
TOP3A-208ENST00000542570 CSF1P09603 554 aa8.96□□□□□ -0.97
TOP3A-208ENST00000542570 DUX4L2P0CJ85 424 aa8.96□□□□□ -0.97
TOP3A-208ENST00000542570 DUX4L3P0CJ86 424 aa8.96□□□□□ -0.97
TOP3A-208ENST00000542570 DUX4L4P0CJ87 422 aa8.96□□□□□ -0.97
TOP3A-208ENST00000542570 DUX4L5P0CJ88 424 aa8.96□□□□□ -0.97
TOP3A-208ENST00000542570 DUX4L6P0CJ89 424 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms