RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 STK17BO94768 372 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 HLA-AP01891 365 aaKnown RBP5.77□□□□□ -1.49
PTPRO-208ENST00000542557 CELA2AP08217 269 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 NMBP08949 121 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 SLC25A4P12235 298 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 PRF1P14222 555 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 ABOP16442 354 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 KLK2P20151 261 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 THBS4P35443 961 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 SUCLG1P53597 346 aaKnown RBP5.77□□□□□ -1.49
PTPRO-208ENST00000542557 CSNK2A1P68400 391 aaPredicted RBP5.77□□□□□ -1.49
PTPRO-208ENST00000542557 CXADRP78310 365 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 SORDQ00796 357 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 VAX1Q5SQQ9 334 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 GLIPR1L1Q6UWM5 242 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 SLC51BQ86UW2 128 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 NAA40Q86UY6 237 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 COMMD2Q86X83 199 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 ZNF101Q8IZC7 436 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 ZNF283Q8N7M2 679 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 GJC3Q8NFK1 279 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 MITD1Q8WV92 249 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 NABP1Q96AH0 204 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 TMEM41AQ96HV5 264 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 NAA11Q9BSU3 229 aaPredicted RBP5.77□□□□□ -1.49
PTPRO-208ENST00000542557 ZNF416Q9BWM5 594 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 MFFQ9GZY8 342 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 NCOR1P1Q9H4R4 102 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.77□□□□□ -1.49
PTPRO-208ENST00000542557 ZNF319Q9P2F9 582 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 FLVCR1Q9Y5Y0 555 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 TNRC18O15417 2968 aaPredicted RBP5.77□□□□□ -1.49
PTPRO-208ENST00000542557 A0A0A6YYD4 124 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 A0A0D9SG52 128 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 C19orf67A6NJJ6 358 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 CEACAM18A8MTB9 384 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 CER1O95813 267 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 IGHEP01854 428 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 CFIP05156 583 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 CCL3P10147 92 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 SLC2A1P11166 492 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 HIST1H1DP16402 221 aaKnown RBP5.77□□□□□ -1.49
PTPRO-208ENST00000542557 GNB3P16520 340 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 OTX1P32242 354 aaPredicted RBP5.77□□□□□ -1.49
PTPRO-208ENST00000542557 HRH1P35367 487 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 CD96P40200 585 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 GUCA1AP43080 201 aaPredicted RBP5.77□□□□□ -1.49
PTPRO-208ENST00000542557 MLF1P58340 268 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 TAS2R31P59538 309 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 ARPC4P59998 168 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 ECH1Q13011 328 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 ENDOGQ14249 297 aaKnown RBP5.77□□□□□ -1.49
PTPRO-208ENST00000542557 NKPD1Q17RQ9 610 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 FAM209AQ5JX71 171 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 RAET1LQ5VY80 246 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 SIGIRRQ6IA17 410 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 LIN54Q6MZP7 749 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 RFPL4BQ6ZWI9 263 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 FAM57BQ71RH2 274 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 TMEM123Q8N131 208 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 BEST3Q8N1M1 668 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 ARRDC1Q8N5I2 433 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 GVQW1Q8N7I0 195 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 OR56B1Q8NGI3 324 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 LRRC20Q8TCA0 184 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 RBPMSQ93062 196 aaKnown RBP5.77□□□□□ -1.49
PTPRO-208ENST00000542557 C10orf35Q96D05 121 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 FAM71F1Q96KD3 344 aaPredicted RBP5.77□□□□□ -1.49
PTPRO-208ENST00000542557 DHRS9Q9BPW9 319 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 URM1Q9BTM9 101 aaKnown RBP5.77□□□□□ -1.49
PTPRO-208ENST00000542557 TMEM59Q9BXS4 323 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 SELENOIQ9C0D9 397 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 KCNK7Q9Y2U2 307 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 NOP16Q9Y3C1 178 aaKnown RBP5.77□□□□□ -1.49
PTPRO-208ENST00000542557 V9GYS6 101 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 SDK1Q7Z5N4 2213 aa5.77□□□□□ -1.49
PTPRO-208ENST00000542557 SPEGQ15772 3267 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 C9orf170A2RU37 121 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 OR5H14A6NHG9 310 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 GJE1A6NN92 205 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 MFNGO00587 321 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 APOC1P02654 83 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 HCKP08631 526 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 CD63P08962 238 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 MGMTP16455 207 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 CBX5P45973 191 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 OR3A4PP47883 348 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 RPS27AP62979 156 aaKnown RBP5.76□□□□□ -1.49
PTPRO-208ENST00000542557 UBA52P62987 128 aaKnown RBP5.76□□□□□ -1.49
PTPRO-208ENST00000542557 PPP1R1AQ13522 171 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 HYAL4Q2M3T9 481 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 SFRP5Q5T4F7 317 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 OR52W1Q6IF63 320 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 RGS7BPQ6MZT1 257 aaPredicted RBP5.76□□□□□ -1.49
PTPRO-208ENST00000542557 CD163Q86VB7 1156 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 HOGA1Q86XE5 327 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 FAM89BQ8N5H3 189 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 OR9K2Q8NGE7 335 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 SUN5Q8TC36 379 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 RAB3CQ96E17 227 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms