RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 LOC100130705A0A1B0GUX0 176 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 KIAA1324LA8MWY0 1029 aaPredicted RBP8.17□□□□□ -1.1
YBX3-212ENST00000542002 PLPP2O43688 288 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 FAM20BO75063 409 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 ZNF254O75437 659 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 IGLV3-1P01715 115 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 APOC1P02654 83 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 ANPEPP15144 967 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 DCTDP32321 178 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 SRP9P49458 86 aaKnown RBP8.17□□□□□ -1.1
YBX3-212ENST00000542002 PSMA6P60900 246 aaKnown RBP8.17□□□□□ -1.1
YBX3-212ENST00000542002 CDC42P60953 191 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 SEC61A1P61619 476 aaKnown RBP8.17□□□□□ -1.1
YBX3-212ENST00000542002 ZNF85Q03923 595 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 RCN1Q15293 331 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 OR8B8Q15620 311 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 OCLNQ16625 522 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 LRRC36Q1X8D7 754 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 DMRTC1Q5HYR2 192 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 FAM120AOSQ5T036 256 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 FAM166AQ6J272 317 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 KCTD18Q6PI47 426 aaPredicted RBP8.17□□□□□ -1.1
YBX3-212ENST00000542002 ZNF826PQ6ZT77 177 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 GALNT4Q8N4A0 578 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 C19orf18Q8NEA5 215 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 RHOXF1Q8NHV9 184 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 Q8TCH9 128 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 NIPAL2Q9H841 368 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 SP140LQ9H930 580 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 ORC6Q9Y5N6 252 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 GMPPBQ9Y5P6 360 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 TMEM14AQ9Y6G1 99 aa8.17□□□□□ -1.1
YBX3-212ENST00000542002 A0A0U1RQV5 110 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 A0A1B0GTI1 187 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 ISPDA4D126 451 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 ACOD1A6NK06 481 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 ZNF850A8MQ14 1090 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 B4DSR2 109 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 ZNF670-ZNF695F2Z2N8 137 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 TNFRSF13BO14836 293 aaPredicted RBP8.16□□□□□ -1.1
YBX3-212ENST00000542002 SLC16A6O15403 523 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 AVPP01185 164 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 TTRP02766 147 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 GRPP07492 148 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 MSMBP08118 114 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 OR2T7P0C7T2 308 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 THBS2P35442 1172 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 DDOSTP39656 456 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 BTG1P62324 171 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 EGR3Q06889 387 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 SLC3A1Q07837 685 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 ZNF181Q2M3W8 571 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 CR1LQ2VPA4 569 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 C1orf229Q6ZS94 237 aaPredicted RBP8.16□□□□□ -1.1
YBX3-212ENST00000542002 KRT74Q7RTS7 529 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 CELF2-AS1Q8N7Q2 184 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 OR10H4Q8NGA5 316 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 OR2T27Q8NH04 317 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 OR51E1Q8TCB6 317 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 APH1BQ8WW43 257 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 RORBQ92753 470 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 STMN2Q93045 179 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 RNFT2Q96EX2 444 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 TIMD4Q96H15 378 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 MNTQ99583 582 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 GAL3ST1Q99999 423 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 ADAT1Q9BUB4 502 aaKnown RBP8.16□□□□□ -1.1
YBX3-212ENST00000542002 SLC22A4Q9H015 551 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 RGCCQ9H4X1 137 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 OPA3Q9H6K4 179 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 METTL17Q9H7H0 456 aaPredicted RBP8.16□□□□□ -1.1
YBX3-212ENST00000542002 AMBNQ9NP70 447 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 HIF1ANQ9NWT6 349 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 TMEM160Q9NX00 188 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 IMPAD1Q9NX62 359 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 UBAP1Q9NZ09 502 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 NKX1-2Q9UD57 310 aaPredicted RBP8.16□□□□□ -1.1
YBX3-212ENST00000542002 IKZF2Q9UKS7 526 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 SLC22A13Q9Y226 551 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 EXOGQ9Y2C4 368 aaKnown RBP8.16□□□□□ -1.1
YBX3-212ENST00000542002 R4GMQ9 66 aa8.16□□□□□ -1.1
YBX3-212ENST00000542002 METTL15A6NJ78 407 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 ANKRD30BLA7E2S9 258 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 F5H0A9 414 aaPredicted RBP8.15□□□□□ -1.1
YBX3-212ENST00000542002 TRAPPC2LH3BP13 241 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 WBP4O75554 376 aaKnown RBP8.15□□□□□ -1.1
YBX3-212ENST00000542002 RPP14O95059 124 aaKnown RBP8.15□□□□□ -1.1
YBX3-212ENST00000542002 CLIC3O95833 236 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 CST4P01036 141 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 LHBP01229 141 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 WNT2P09544 360 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 PEX2P28328 305 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 MTNR1AP48039 350 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 RIDAP52758 137 aaKnown RBP8.15□□□□□ -1.1
YBX3-212ENST00000542002 DVL1P1P54792 670 aaPredicted RBP8.15□□□□□ -1.1
YBX3-212ENST00000542002 ISL1P61371 349 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 ELF3P78545 371 aaPredicted RBP8.15□□□□□ -1.1
YBX3-212ENST00000542002 GABPB1Q06547 395 aaPredicted RBP8.15□□□□□ -1.1
YBX3-212ENST00000542002 POU4F2Q12837 409 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 PRDX4Q13162 271 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms