RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 HEATR5AQ86XA9 2040 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 SOCS1O15524 211 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 MBTPS2O43462 519 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 SNTB1Q13884 538 aaKnown RBP14.36□□□□□ -0.11
VARS2-212ENST00000542001 THEM4Q5T1C6 240 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 MKXQ8IYA7 352 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 SPEM1Q8N4L4 309 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 OR11G2Q8NGC1 345 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 ASB5Q8WWX0 329 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 AKIRIN1Q9H9L7 192 aaPredicted RBP14.36□□□□□ -0.11
VARS2-212ENST00000542001 CRLF2Q9HC73 371 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 PLA2G3Q9NZ20 509 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 ATPIF1Q9UII2 106 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 EDARQ9UNE0 448 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 ZNF175Q9Y473 711 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 DIDO1Q9BTC0 2240 aaKnown RBP14.36□□□□□ -0.11
VARS2-212ENST00000542001 ITGB2P05107 769 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 PSMB6P28072 239 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 CD80P33681 288 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 CAMK2BQ13554 666 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 SPATA46Q5T0L3 261 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 DCAF12Q5T6F0 453 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 C5orf46Q6UWT4 87 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 TRILQ7L0X0 811 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 CDC20BQ86Y33 519 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 ESRP2Q9H6T0 727 aaKnown RBP14.36□□□□□ -0.11
VARS2-212ENST00000542001 WIF1Q9Y5W5 379 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 FER1L5A0AVI2 2057 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 IGKV1D-42A0A075B6H8 117 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 ARPC4-TTLL3A0A0A6YYG9 625 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 MCRIP1C9JLW8 97 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 HOXC4P09017 264 aaPredicted RBP14.36□□□□□ -0.11
VARS2-212ENST00000542001 ZNF728P0DKX0 622 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 MOGAT2Q3SYC2 334 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 H3F3CQ6NXT2 135 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 VHLLQ6RSH7 139 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 KCNRGQ8N5I3 272 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 OR51F2Q8NH61 342 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 OR1S1Q8NH92 325 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 CPT1CQ8TCG5 803 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 MRPS18BQ9Y676 258 aaKnown RBP14.36□□□□□ -0.11
VARS2-212ENST00000542001 EIF1P41567 113 aaKnown RBP14.36□□□□□ -0.11
VARS2-212ENST00000542001 ANKRD37Q7Z713 158 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 SCGB1C1Q8TD33 95 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 NINJ1Q92982 152 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 KCNJ15Q99712 375 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 NLRC5Q86WI3 1866 aa14.36□□□□□ -0.11
VARS2-212ENST00000542001 DHHO43323 396 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 NME2P1O60361 137 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 GALP22466 123 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 ZNF658BQ4V348 819 aaPredicted RBP14.35□□□□□ -0.11
VARS2-212ENST00000542001 C19orf48Q6RUI8 117 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 NAXDQ8IW45 347 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 CDH26Q8IXH8 852 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 PRSS35Q8N3Z0 413 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 SEMA6DQ8NFY4 1073 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 MCHR2Q969V1 340 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 DEFB127Q9H1M4 99 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 SLCO5A1Q9H2Y9 848 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 A0A1W2PR80 420 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 LEUTXA8MZ59 168 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 LINC00271P0C7V0 271 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 CYB561P49447 251 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 RRADP55042 308 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 TAS2R46P59540 309 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 SMAD4Q13485 552 aaKnown RBP14.35□□□□□ -0.11
VARS2-212ENST00000542001 CEACAM16Q2WEN9 425 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 SLC25A26Q70HW3 274 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 MCTS1Q9ULC4 181 aaKnown RBP14.35□□□□□ -0.11
VARS2-212ENST00000542001 H3BP45 60 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 RGS13O14921 159 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 CHRM2P08172 466 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 RIPPLY1Q0D2K3 151 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 CNN3Q15417 329 aaKnown RBP14.35□□□□□ -0.11
VARS2-212ENST00000542001 DOK3Q7L591 496 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 CTHRC1Q96CG8 243 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 ADAT3Q96EY9 351 aaPredicted RBP14.35□□□□□ -0.11
VARS2-212ENST00000542001 PLPPR2Q96GM1 343 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 AIFM2Q9BRQ8 373 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 SARGQ9BW04 601 aa14.35□□□□□ -0.11
VARS2-212ENST00000542001 SNRPGP15A8MWD9 76 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 D6RAR5 112 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 SULT1A3P0DMM9 295 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 SULT1A4P0DMN0 295 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 TLE1Q04724 770 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 TSPO2Q5TGU0 170 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 ZNF529Q6P280 563 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 SLC22A25Q6T423 547 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 SLC39A7Q92504 469 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 MFRPQ9BY79 579 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 FAM234AQ9H0X4 552 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 LANCL2Q9NS86 450 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 PLXND1Q9Y4D7 1925 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 KRBOX1C9JBD0 128 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 VSIG10L2P0DP72 767 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 CLPPQ16740 277 aaPredicted RBP14.34□□□□□ -0.11
VARS2-212ENST00000542001 OR2B11Q5JQS5 317 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 ZNF684Q5T5D7 378 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 ZNF721Q8TF20 911 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 VOPP1Q96AW1 172 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms