RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 RPL15P61313 204 aaKnown RBP12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 KCNJ8Q15842 424 aa12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 CDONQ4KMG0 1287 aa12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 KLHL12Q53G59 568 aa12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 WDR82Q6UXN9 313 aa12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 ZNF511Q8NB15 262 aa12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 LY6G5BQ8NDX9 201 aa12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 PROKR2Q8NFJ6 384 aa12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 SPTSSAQ969W0 71 aa12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 FGF23Q9GZV9 251 aaPredicted RBP12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 SLC22A4Q9H015 551 aa12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 NSRP1Q9H0G5 558 aaKnown RBP12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 CNTD2Q9H8S5 307 aa12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 EFCAB1Q9HAE3 211 aa12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 ONECUT1Q9UBC0 465 aa12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 KAAG1Q9UBP8 84 aa12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 SIGLEC9Q9Y336 463 aa12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 TET2Q6N021 2002 aaPredicted RBP12.69□□□□□ -0.38
CLSTN3-213ENST00000541953 ZNF816-ZNF321PA0A0X1KG74 233 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 MEGF11A6BM72 1044 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 G3V4G9 280 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 PRB2P02812 416 aaPredicted RBP12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 CLUP10909 449 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 PAX6P26367 422 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 RRM2P31350 389 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 GMFBP60983 142 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 EGR3Q06889 387 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 DRAM2Q6UX65 266 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 ZDHHC21Q8IVQ6 265 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 PLPP7Q8NBV4 271 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 SLC37A3Q8NCC5 494 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 OR9Q2Q8NGE9 314 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 OR5T2Q8NGG2 359 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 C17orf50Q8WW18 174 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 SLAMF6Q96DU3 332 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 BTBD10Q9BSF8 475 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 COPS4Q9BT78 406 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 C16orf95Q9H693 158 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 KRCC1Q9NPI7 259 aaPredicted RBP12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 ZNF319Q9P2F9 582 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 VPREB3Q9UKI3 123 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 SAMD4AQ9UPU9 718 aaKnown RBP12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 KPTNQ9Y664 436 aa12.68□□□□□ -0.38
CLSTN3-213ENST00000541953 NDUFA2O43678 99 aa12.67□□□□□ -0.38
CLSTN3-213ENST00000541953 SPARCP09486 303 aa12.67□□□□□ -0.38
CLSTN3-213ENST00000541953 ZNF823P16415 610 aa12.67□□□□□ -0.38
CLSTN3-213ENST00000541953 FAM3AP98173 230 aa12.67□□□□□ -0.38
CLSTN3-213ENST00000541953 TSPAN31Q12999 210 aa12.67□□□□□ -0.38
CLSTN3-213ENST00000541953 IKZF1Q13422 519 aa12.67□□□□□ -0.38
CLSTN3-213ENST00000541953 KRT72Q14CN4 511 aa12.67□□□□□ -0.38
CLSTN3-213ENST00000541953 DHRS7BQ6IAN0 325 aaPredicted RBP12.67□□□□□ -0.38
CLSTN3-213ENST00000541953 SLC16A9Q7RTY1 509 aa12.67□□□□□ -0.38
CLSTN3-213ENST00000541953 OR1M1Q8NGA1 313 aa12.67□□□□□ -0.38
CLSTN3-213ENST00000541953 TNFRSF14Q92956 283 aa12.67□□□□□ -0.38
CLSTN3-213ENST00000541953 SPSB4Q96A44 273 aa12.67□□□□□ -0.38
CLSTN3-213ENST00000541953 AMELYQ99218 206 aa12.67□□□□□ -0.38
CLSTN3-213ENST00000541953 WDR13Q9H1Z4 485 aa12.67□□□□□ -0.38
CLSTN3-213ENST00000541953 CENPMQ9NSP4 180 aa12.67□□□□□ -0.38
CLSTN3-213ENST00000541953 KCNG2Q9UJ96 466 aa12.67□□□□□ -0.38
CLSTN3-213ENST00000541953 A0A1B0GVI7 797 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 TSPAN9O75954 239 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 ECDO95905 644 aaPredicted RBP12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 CRMP1Q14194 572 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 BEAN1Q3B7T3 259 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 STUMQ69YW2 141 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 GDPGP1Q6ZNW5 385 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 PRSS45Q7RTY3 260 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 OR4Q3Q8NH05 313 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 PPP1R35Q8TAP8 253 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 SGK3Q96BR1 496 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 PYURFQ96I23 114 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 KCNJ15Q99712 375 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 MYLK2Q9H1R3 596 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 CCDC134Q9H6E4 229 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 TRIM36Q9NQ86 728 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 SNTG1Q9NSN8 517 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 ZNF446Q9NWS9 450 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 PRPF19Q9UMS4 504 aaKnown RBP12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 NOP16Q9Y3C1 178 aaKnown RBP12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 CDH10Q9Y6N8 788 aa12.66□□□□□ -0.38
CLSTN3-213ENST00000541953 hCG_38984A0A1B0GV85 526 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 DHRS12A0PJE2 317 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 CDIPTO14735 213 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 NPFFO15130 113 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 TBX1O43435 398 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 IDH3BO43837 385 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 FBP1P09467 338 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 SAA4P35542 130 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 TGM4P49221 684 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 CX3CR1P49238 355 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 ENTPD1P49961 510 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 PPP1R8Q12972 351 aaKnown RBP12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 LINC01590Q5TEZ4 76 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 SLC35E4Q6ICL7 350 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 HCP5Q6MZN7 132 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 METAP1DQ6UB28 335 aaPredicted RBP12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 DPY19L4Q7Z388 723 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 C11orf44Q8N8P7 122 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 REEP6Q96HR9 211 aa12.65□□□□□ -0.38
CLSTN3-213ENST00000541953 AJUBAQ96IF1 538 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms