RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 CLDN23Q96B33 292 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 NEIL1Q96FI4 390 aaPredicted RBP9.71□□□□□ -0.86
GABRB3-204ENST00000541819 MAGT1Q9H0U3 335 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 IFT172Q9UG01 1749 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 KAT6AQ92794 2004 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 ANKUB1A6NFN9 424 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 ZNF121P58317 390 aaPredicted RBP9.71□□□□□ -0.86
GABRB3-204ENST00000541819 TRAT1Q6PIZ9 186 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 Q6ZSR9 355 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 TMED6Q8WW62 240 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 TNFRSF19Q9NS68 423 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 MED29Q9NX70 200 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 DHHO43323 396 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 GPX2P18283 190 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 BAK1Q16611 211 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 ZNF260Q3ZCT1 412 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 SOWAHCQ53LP3 525 aaPredicted RBP9.71□□□□□ -0.86
GABRB3-204ENST00000541819 OTUD1Q5VV17 481 aaPredicted RBP9.71□□□□□ -0.86
GABRB3-204ENST00000541819 TTC9Q92623 222 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 ADGRG7Q96K78 797 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 SPACA5Q96QH8 159 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 THYN1Q9P016 225 aa9.71□□□□□ -0.86
GABRB3-204ENST00000541819 ZNF142P52746 1687 aaPredicted RBP9.7□□□□□ -0.86
GABRB3-204ENST00000541819 A0A1W2PPQ1 181 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 A0A1W2PR48 441 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 TMEM202A6NGA9 273 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 FGF2P09038 288 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 NPY1RP25929 384 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 POLR2IP36954 125 aaKnown RBP9.7□□□□□ -0.86
GABRB3-204ENST00000541819 CEACAM3P40198 252 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 NHLH1Q02575 133 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 NHLH2Q02577 135 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 PLA1AQ53H76 456 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 KLHDC9Q8NEP7 349 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 OR1L4Q8NGR5 311 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 DUS3LQ96G46 650 aaKnown RBP9.7□□□□□ -0.86
GABRB3-204ENST00000541819 OR2T8A6NH00 312 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 K7ESM1 405 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 GLULP15104 373 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 CD200P41217 278 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 MNX1P50219 401 aaPredicted RBP9.7□□□□□ -0.86
GABRB3-204ENST00000541819 BTG2P78543 158 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 DPTQ07507 201 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 SLC17A1Q14916 467 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 PNLIPRP3Q17RR3 467 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 PTRH1Q86Y79 214 aaKnown RBP9.7□□□□□ -0.86
GABRB3-204ENST00000541819 OR4A4PQ8NGN8 299 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 SLC35B4Q969S0 331 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 MS4A4AQ96JQ5 239 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 ZIC5Q96T25 663 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 C12orf10Q9HB07 376 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 SEBOXQ9HB31 216 aaPredicted RBP9.7□□□□□ -0.86
GABRB3-204ENST00000541819 HINT3Q9NQE9 182 aaKnown RBP9.7□□□□□ -0.86
GABRB3-204ENST00000541819 C7orf72A4D263 438 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 SPRY1O43609 319 aaPredicted RBP9.7□□□□□ -0.86
GABRB3-204ENST00000541819 RNASEKQ6P5S7 137 aaKnown RBP9.7□□□□□ -0.86
GABRB3-204ENST00000541819 ZNF574Q6ZN55 896 aaPredicted RBP9.7□□□□□ -0.86
GABRB3-204ENST00000541819 CALHM3Q86XJ0 350 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 NUDCD2Q8WVJ2 157 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 SHISA4Q96DD7 197 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 RAB1BQ9H0U4 201 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 FKBP11Q9NYL4 201 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 TCFL5Q9UL49 500 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 PPIL1Q9Y3C6 166 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 FAM208AQ9UK61 1670 aaKnown RBP9.7□□□□□ -0.86
GABRB3-204ENST00000541819 A0A087WV62 115 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 PTBP3O95758 552 aaKnown RBP9.7□□□□□ -0.86
GABRB3-204ENST00000541819 SEMG1P04279 462 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 CD37P11049 281 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 CDC34P49427 236 aaPredicted RBP9.7□□□□□ -0.86
GABRB3-204ENST00000541819 RAB7AP51149 207 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 CCL7P80098 99 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 DGCR2P98153 550 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 CGB2Q6NT52 195 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 LYG2Q86SG7 212 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 MYPOPQ86VE0 399 aaPredicted RBP9.7□□□□□ -0.86
GABRB3-204ENST00000541819 LYSMD2Q8IV50 215 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 SYS1Q8N2H4 156 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 ADPRHL1Q8NDY3 354 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 ADIPOR1Q96A54 375 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 SLCO1C1Q9NYB5 712 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 ICAM5Q9UMF0 924 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 POMT1Q9Y6A1 747 aa9.7□□□□□ -0.86
GABRB3-204ENST00000541819 LTN1O94822 1766 aa9.69□□□□□ -0.86
GABRB3-204ENST00000541819 ST6GAL1P15907 406 aa9.69□□□□□ -0.86
GABRB3-204ENST00000541819 MGMTP16455 207 aa9.69□□□□□ -0.86
GABRB3-204ENST00000541819 PMCHP20382 165 aa9.69□□□□□ -0.86
GABRB3-204ENST00000541819 RPS19P39019 145 aaKnown RBP9.69□□□□□ -0.86
GABRB3-204ENST00000541819 PJVKQ0ZLH3 352 aa9.69□□□□□ -0.86
GABRB3-204ENST00000541819 OR4D10Q8NGI6 311 aa9.69□□□□□ -0.86
GABRB3-204ENST00000541819 OR1L1Q8NH94 360 aa9.69□□□□□ -0.86
GABRB3-204ENST00000541819 C16orf52Q8NHV5 167 aa9.69□□□□□ -0.86
GABRB3-204ENST00000541819 FMN2Q9NZ56 1722 aa9.69□□□□□ -0.86
GABRB3-204ENST00000541819 B4GALT3O60512 393 aa9.69□□□□□ -0.86
GABRB3-204ENST00000541819 LIPAP38571 399 aa9.69□□□□□ -0.86
GABRB3-204ENST00000541819 ZNF83P51522 516 aa9.69□□□□□ -0.86
GABRB3-204ENST00000541819 FOXF1Q12946 379 aa9.69□□□□□ -0.86
GABRB3-204ENST00000541819 ZNF528Q3MIS6 628 aa9.69□□□□□ -0.86
GABRB3-204ENST00000541819 VWA1Q6PCB0 445 aa9.69□□□□□ -0.86
GABRB3-204ENST00000541819 PAQR9Q6ZVX9 377 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms