RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 N6AMT1Q9Y5N5 214 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 ISPDA4D126 451 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 LRRC30A6NM36 301 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 ANKRD30BLA7E2S9 258 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 F5H0A9 414 aaPredicted RBP11.02□□□□□ -0.65
LTBR-208ENST00000541005 SRSF10O75494 262 aaKnown RBP11.02□□□□□ -0.65
LTBR-208ENST00000541005 IGLV3-1P01715 115 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 ANPEPP15144 967 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 HNF1AP20823 631 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 CPT2P23786 658 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 PMELP40967 661 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 RIDAP52758 137 aaKnown RBP11.02□□□□□ -0.65
LTBR-208ENST00000541005 CXCR4P61073 352 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 SNRPGP62308 76 aaKnown RBP11.02□□□□□ -0.65
LTBR-208ENST00000541005 MZT1Q08AG7 82 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 CR1LQ2VPA4 569 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 ZNF829Q3KNS6 432 aaPredicted RBP11.02□□□□□ -0.65
LTBR-208ENST00000541005 ZNF322Q6U7Q0 402 aaPredicted RBP11.02□□□□□ -0.65
LTBR-208ENST00000541005 C1orf87Q8N0U7 546 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 MUC20Q8N307 709 aaPredicted RBP11.02□□□□□ -0.65
LTBR-208ENST00000541005 FTMTQ8N4E7 242 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 ZNF420Q8TAQ5 688 aaPredicted RBP11.02□□□□□ -0.65
LTBR-208ENST00000541005 RFKQ969G6 155 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 EME1Q96AY2 570 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 SHARPINQ9H0F6 387 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 MOB1AQ9H8S9 216 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 BRD7Q9NPI1 651 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 IMPAD1Q9NX62 359 aa11.02□□□□□ -0.65
LTBR-208ENST00000541005 NUFIP1Q9UHK0 495 aaKnown RBP11.02□□□□□ -0.65
LTBR-208ENST00000541005 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.01□□□□□ -0.65
LTBR-208ENST00000541005 TMEM269A0A1B0GVZ9 245 aa11.01□□□□□ -0.65
LTBR-208ENST00000541005 ZNF670-ZNF695F2Z2N8 137 aa11.01□□□□□ -0.65
LTBR-208ENST00000541005 OR2T7P0C7T2 308 aa11.01□□□□□ -0.65
LTBR-208ENST00000541005 ZSCAN26Q16670 478 aa11.01□□□□□ -0.65
LTBR-208ENST00000541005 OR51G2Q8NGK0 314 aa11.01□□□□□ -0.65
LTBR-208ENST00000541005 OR11L1Q8NGX0 322 aa11.01□□□□□ -0.65
LTBR-208ENST00000541005 OR2T27Q8NH04 317 aa11.01□□□□□ -0.65
LTBR-208ENST00000541005 STMN2Q93045 179 aa11.01□□□□□ -0.65
LTBR-208ENST00000541005 LYZL4Q96KX0 146 aa11.01□□□□□ -0.65
LTBR-208ENST00000541005 SLC29A1Q99808 456 aa11.01□□□□□ -0.65
LTBR-208ENST00000541005 BEX2Q9BXY8 128 aa11.01□□□□□ -0.65
LTBR-208ENST00000541005 FN3KRPQ9HA64 309 aa11.01□□□□□ -0.65
LTBR-208ENST00000541005 PATZ1Q9HBE1 687 aaKnown RBP11.01□□□□□ -0.65
LTBR-208ENST00000541005 ABCB9Q9NP78 766 aa11.01□□□□□ -0.65
LTBR-208ENST00000541005 G6PC2Q9NQR9 355 aa11.01□□□□□ -0.65
LTBR-208ENST00000541005 HIF1ANQ9NWT6 349 aa11.01□□□□□ -0.65
LTBR-208ENST00000541005 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.01□□□□□ -0.65
LTBR-208ENST00000541005 POLR3KQ9Y2Y1 108 aaPredicted RBP11.01□□□□□ -0.65
LTBR-208ENST00000541005 PPIAL4EA0A075B759 164 aa11□□□□□ -0.65
LTBR-208ENST00000541005 PPIAL4CA0A0B4J2A2 164 aa11□□□□□ -0.65
LTBR-208ENST00000541005 IGHV3-64DA0A0J9YX35 117 aa11□□□□□ -0.65
LTBR-208ENST00000541005 A8MXK9 166 aa11□□□□□ -0.65
LTBR-208ENST00000541005 PPIAL4DF5H284 164 aa11□□□□□ -0.65
LTBR-208ENST00000541005 PSMD9O00233 223 aa11□□□□□ -0.65
LTBR-208ENST00000541005 PLPP2O43688 288 aa11□□□□□ -0.65
LTBR-208ENST00000541005 FAM20BO75063 409 aa11□□□□□ -0.65
LTBR-208ENST00000541005 CYB5R3P00387 301 aaPredicted RBP11□□□□□ -0.65
LTBR-208ENST00000541005 CST4P01036 141 aa11□□□□□ -0.65
LTBR-208ENST00000541005 PPIAL4FP0DN26 164 aa11□□□□□ -0.65
LTBR-208ENST00000541005 ATP6V1B1P15313 513 aa11□□□□□ -0.65
LTBR-208ENST00000541005 GABRB1P18505 474 aa11□□□□□ -0.65
LTBR-208ENST00000541005 ACKR3P25106 362 aa11□□□□□ -0.65
LTBR-208ENST00000541005 THBS2P35442 1172 aa11□□□□□ -0.65
LTBR-208ENST00000541005 RBMXP38159 391 aaKnown RBP11□□□□□ -0.65
LTBR-208ENST00000541005 MFGE8Q08431 387 aaPredicted RBP11□□□□□ -0.65
LTBR-208ENST00000541005 MPPED2Q15777 294 aa11□□□□□ -0.65
LTBR-208ENST00000541005 OCLNQ16625 522 aa11□□□□□ -0.65
LTBR-208ENST00000541005 GFOD2Q3B7J2 385 aa11□□□□□ -0.65
LTBR-208ENST00000541005 ZIK1Q3SY52 487 aaPredicted RBP11□□□□□ -0.65
LTBR-208ENST00000541005 ZNF684Q5T5D7 378 aa11□□□□□ -0.65
LTBR-208ENST00000541005 PRAMEF6Q5VXH4 476 aa11□□□□□ -0.65
LTBR-208ENST00000541005 MEDAGQ5VYS4 303 aa11□□□□□ -0.65
LTBR-208ENST00000541005 ZBTB49Q6ZSB9 765 aa11□□□□□ -0.65
LTBR-208ENST00000541005 KLHL36Q8N4N3 616 aa11□□□□□ -0.65
LTBR-208ENST00000541005 DVL3Q92997 716 aaPredicted RBP11□□□□□ -0.65
LTBR-208ENST00000541005 RDH12Q96NR8 316 aa11□□□□□ -0.65
LTBR-208ENST00000541005 PAPOLGQ9BWT3 736 aaKnown RBP11□□□□□ -0.65
LTBR-208ENST00000541005 TTTY10Q9BZA0 68 aa11□□□□□ -0.65
LTBR-208ENST00000541005 PBOV1Q9GZY1 135 aa11□□□□□ -0.65
LTBR-208ENST00000541005 C14orf119Q9NWQ9 140 aa11□□□□□ -0.65
LTBR-208ENST00000541005 UBAP1Q9NZ09 502 aa11□□□□□ -0.65
LTBR-208ENST00000541005 MRM2Q9UI43 246 aaKnown RBP11□□□□□ -0.65
LTBR-208ENST00000541005 IKZF2Q9UKS7 526 aa11□□□□□ -0.65
LTBR-208ENST00000541005 R4GMQ9 66 aa11□□□□□ -0.65
LTBR-208ENST00000541005 COL6A5A8TX70 2615 aa11□□□□□ -0.65
LTBR-208ENST00000541005 A0A1W2PQL4 384 aaPredicted RBP10.99□□□□□ -0.65
LTBR-208ENST00000541005 CEACAM18A8MTB9 384 aa10.99□□□□□ -0.65
LTBR-208ENST00000541005 J3QRE1 110 aa10.99□□□□□ -0.65
LTBR-208ENST00000541005 FOXH1O75593 365 aa10.99□□□□□ -0.65
LTBR-208ENST00000541005 SULT1C4O75897 302 aa10.99□□□□□ -0.65
LTBR-208ENST00000541005 PNPP00491 289 aa10.99□□□□□ -0.65
LTBR-208ENST00000541005 IRF2P14316 349 aa10.99□□□□□ -0.65
LTBR-208ENST00000541005 SRD5A1P18405 259 aa10.99□□□□□ -0.65
LTBR-208ENST00000541005 GATA3P23771 443 aa10.99□□□□□ -0.65
LTBR-208ENST00000541005 MTNR1AP48039 350 aa10.99□□□□□ -0.65
LTBR-208ENST00000541005 IL5RAQ01344 420 aa10.99□□□□□ -0.65
LTBR-208ENST00000541005 ZNF404Q494X3 552 aa10.99□□□□□ -0.65
LTBR-208ENST00000541005 ZBTB37Q5TC79 503 aa10.99□□□□□ -0.65
LTBR-208ENST00000541005 Q6ZSR3 168 aa10.99□□□□□ -0.65
LTBR-208ENST00000541005 SSX6Q7RTT6 188 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms