RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 CLEC2LP0C7M8 214 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 RFPL3SP0C7P2 107 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 ZNF20P17024 532 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 MNDAP41218 407 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 LHX2P50458 406 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 CLDN20P56880 219 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 HIST1H3AP68431 136 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 FMODQ06828 376 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 ASAH1Q13510 395 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 RAB35Q15286 201 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 RAB11BQ15907 218 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 ETFDHQ16134 617 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 SLC36A2Q495M3 483 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 ELFN2Q5R3F8 820 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 HIST2H3PS2Q5TEC6 136 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 STEAP3Q658P3 488 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 OR2A2Q6IF42 318 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 RAB12Q6IQ22 244 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 ZNF585AQ6P3V2 769 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 DRAM2Q6UX65 266 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 STAC2Q6ZMT1 411 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 HIST2H3AQ71DI3 136 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.29□□□□□ -1.24
CHD4-208ENST00000540960 UBQLNLQ8IYU4 475 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 PRSS35Q8N3Z0 413 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 Q8N402 240 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 RFLNBQ8N5W9 214 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 ZIC4Q8N9L1 334 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 OR6M1Q8NGM8 313 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 SMAP2Q8WU79 429 aaPredicted RBP7.29□□□□□ -1.24
CHD4-208ENST00000540960 RNASE6Q93091 150 aaKnown RBP7.29□□□□□ -1.24
CHD4-208ENST00000540960 PTX4Q96A99 478 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 APH1AQ96BI3 265 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 SARAFQ96BY9 339 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 DNAJA3Q96EY1 480 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 TECTBQ96PL2 329 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 SORCS2Q96PQ0 1159 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 DCLRE1CQ96SD1 692 aaKnown RBP7.29□□□□□ -1.24
CHD4-208ENST00000540960 UQCC2Q9BRT2 126 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 REG4Q9BYZ8 158 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 PBOV1Q9GZY1 135 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 OR10A2Q9H208 303 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 ABCG5Q9H222 651 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 SLCO5A1Q9H2Y9 848 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 BCO1Q9HAY6 547 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 TMEM138Q9NPI0 162 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 ZNF275Q9NSD4 429 aaPredicted RBP7.29□□□□□ -1.24
CHD4-208ENST00000540960 TAS2R8Q9NYW2 309 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 COPZ2Q9P299 210 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 ASH2LQ9UBL3 628 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 EXTL2Q9UBQ6 330 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 STEAP1Q9UHE8 339 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 FBXL3Q9UKT7 428 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 SLC22A13Q9Y226 551 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 V9GYH0 126 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 ROS1P08922 2347 aa7.29□□□□□ -1.24
CHD4-208ENST00000540960 EML6Q6ZMW3 1958 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 A0A0G2JMM0 328 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 LOC100289279A0A1B0GTE1 492 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 A0A1W2PPB8 328 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 LOC390937A0A1W2PQ73 354 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 A0A1W2PRS3 328 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 OR14I1A6ND48 311 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 METTL21EPA6NDL7 271 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 KIR3DP1A8MWS1 328 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 PSMD9O00233 223 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 SLC17A2O00624 439 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 AQP7O14520 342 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 SRSF10O75494 262 aaKnown RBP7.28□□□□□ -1.24
CHD4-208ENST00000540960 IGHG3P01860 377 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 HLA-DQB1P01920 261 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 UBBP0CG47 229 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 COX5BP10606 129 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 IL7P13232 177 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 HOXB1P14653 301 aaPredicted RBP7.28□□□□□ -1.24
CHD4-208ENST00000540960 RAB3AP20336 220 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 ARR3P36575 388 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 MAGEA5P43359 124 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 KIR3DL2P43630 455 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 CLDN18P56856 261 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 TGFBR3Q03167 851 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 SSBP1Q04837 148 aaKnown RBP7.28□□□□□ -1.24
CHD4-208ENST00000540960 ARL6IP1Q15041 203 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 CEP78Q5JTW2 689 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 PRR31Q5SQ13 230 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 TMEM53Q6P2H8 277 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 LYPD4Q6UWN0 246 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 IL17RELQ6ZVW7 336 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 ZNF627Q7L945 461 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 ZNF100Q8IYN0 542 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 ZNF283Q8N7M2 679 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 IL17RDQ8NFM7 739 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 PP6455Q8WZ26 134 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 RFT1Q96AA3 541 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 PGAM5Q96HS1 289 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 ZNF385AQ96PM9 386 aaKnown RBP7.28□□□□□ -1.24
CHD4-208ENST00000540960 UCN2Q96RP3 112 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 SRXN1Q9BYN0 137 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 TTTY10Q9BZA0 68 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 DEFB127Q9H1M4 99 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms