RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 COMTD1Q86VU5 262 aa3.71□□□□□ -1.82
SNHG1-214ENST00000540865 RANBP3LQ86VV4 465 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-214ENST00000540865 KRT73Q86Y46 540 aa3.71□□□□□ -1.82
SNHG1-214ENST00000540865 PNKDQ8N490 385 aa3.71□□□□□ -1.82
SNHG1-214ENST00000540865 Q8N7P7 452 aa3.71□□□□□ -1.82
SNHG1-214ENST00000540865 C8orf46Q8TAG6 207 aa3.71□□□□□ -1.82
SNHG1-214ENST00000540865 ST8SIA4Q92187 359 aa3.71□□□□□ -1.82
SNHG1-214ENST00000540865 HDAC2Q92769 488 aaKnown RBP3.71□□□□□ -1.82
SNHG1-214ENST00000540865 ZBTB18Q99592 522 aa3.71□□□□□ -1.82
SNHG1-214ENST00000540865 NKX3-1Q99801 234 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-214ENST00000540865 ECSITQ9BQ95 431 aa3.71□□□□□ -1.82
SNHG1-214ENST00000540865 DCTN5Q9BTE1 182 aa3.71□□□□□ -1.82
SNHG1-214ENST00000540865 MCRIP2Q9BUT9 160 aaKnown RBP3.71□□□□□ -1.82
SNHG1-214ENST00000540865 ALG12Q9BV10 488 aa3.71□□□□□ -1.82
SNHG1-214ENST00000540865 CDCA4Q9BXL8 241 aa3.71□□□□□ -1.82
SNHG1-214ENST00000540865 PRSS22Q9GZN4 317 aa3.71□□□□□ -1.82
SNHG1-214ENST00000540865 MEAF6Q9HAF1 191 aa3.71□□□□□ -1.82
SNHG1-214ENST00000540865 INIPQ9NRY2 104 aa3.71□□□□□ -1.82
SNHG1-214ENST00000540865 SLC13A4Q9UKG4 626 aa3.71□□□□□ -1.82
SNHG1-214ENST00000540865 NOP16Q9Y3C1 178 aaKnown RBP3.71□□□□□ -1.82
SNHG1-214ENST00000540865 LSM4Q9Y4Z0 139 aaKnown RBP3.71□□□□□ -1.82
SNHG1-214ENST00000540865 TSSC4Q9Y5U2 329 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-214ENST00000540865 OR6C6A6NF89 314 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 F5H697 171 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 H0YHG0 523 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 M0R1W7 72 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 POLR3GO15318 223 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-214ENST00000540865 HDAC3O15379 428 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 CHST1O43916 411 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 TPST1O60507 370 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 RAMP3O60896 148 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 SLC22A3O75751 556 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 LYPD3O95274 346 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 ANP32DO95626 131 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 PTBP3O95758 552 aaKnown RBP3.7□□□□□ -1.82
SNHG1-214ENST00000540865 GYPAP02724 150 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 THY1P04216 161 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 HLA-DPB1P04440 258 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 IL6P05231 212 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 CHRM2P08172 466 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 VIMP08670 466 aaKnown RBP3.7□□□□□ -1.82
SNHG1-214ENST00000540865 EGR2P11161 476 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-214ENST00000540865 UMPSP11172 480 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 BGNP21810 368 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 AQP2P41181 271 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 BMXP51813 675 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 ZNF134P52741 427 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 NME5P56597 212 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 RPS7P62081 194 aaKnown RBP3.7□□□□□ -1.82
SNHG1-214ENST00000540865 RPL18Q07020 188 aaKnown RBP3.7□□□□□ -1.82
SNHG1-214ENST00000540865 CKAP4Q07065 602 aaKnown RBP3.7□□□□□ -1.82
SNHG1-214ENST00000540865 FADDQ13158 208 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 KLRD1Q13241 179 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 FHL2Q14192 279 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 RGNQ15493 299 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 OR8B8Q15620 311 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 MPPED2Q15777 294 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 TCTEX1D4Q5JR98 221 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 BEND6Q5SZJ8 279 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-214ENST00000540865 PRAMEF6Q5VXH4 476 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 TEX36Q5VZQ5 186 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 SFRP4Q6FHJ7 346 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-214ENST00000540865 REEP3Q6NUK4 255 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 C1orf94Q6P1W5 598 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 MSANTD1Q6ZTZ1 278 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 C4orf33Q8N1A6 199 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 C10orf111Q8N326 155 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 BOLLQ8N9W6 283 aaKnown RBP3.7□□□□□ -1.82
SNHG1-214ENST00000540865 BHLHE23Q8NDY6 225 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 OR5AU1Q8NGC0 362 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 PIFOQ8TCI5 191 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 LRRC8CQ8TDW0 803 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 C17orf50Q8WW18 174 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 RORBQ92753 470 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 MAL2Q969L2 176 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 APOBEC3DQ96AK3 386 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-214ENST00000540865 ITCHQ96J02 903 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 MPP4Q96JB8 637 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 PPP1R36Q96LQ0 422 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 MCHR1Q99705 422 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 ASCL2Q99929 193 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 WFDC6Q9BQY6 131 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 ZNF426Q9BUY5 554 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 HCAR1Q9BXC0 346 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 SLC22A4Q9H015 551 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 TXNIPQ9H3M7 391 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 RAD21L1Q9H4I0 556 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 METTL8Q9H825 291 aaKnown RBP3.7□□□□□ -1.82
SNHG1-214ENST00000540865 PPCSQ9HAB8 311 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 POLE4Q9NR33 117 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 UFSP2Q9NUQ7 469 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 AIG1Q9NVV5 245 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 PTTG3PQ9NZH4 202 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 DNAJB11Q9UBS4 358 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 ATPIF1Q9UII2 106 aa3.7□□□□□ -1.82
SNHG1-214ENST00000540865 PRPF19Q9UMS4 504 aaKnown RBP3.7□□□□□ -1.82
SNHG1-214ENST00000540865 TCRBV4S1A1TA0A5B7 111 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 VGLL3A8MV65 326 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 CLIC1O00299 241 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 KPNA4O00629 521 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms