RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 KIR2DS1A0A191URI9 304 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 hCG_1807616A0A1W2PRN6 198 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 OOEPA6NGQ2 149 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 FAM20BO75063 409 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 ZNF254O75437 659 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 FSHBP01225 129 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 HLA-DPB1P04440 258 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 GYPBP06028 91 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 T-ENOLP0DO92 83 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 ZFP36P26651 326 aaKnown RBP8.7□□□□□ -1.02
CDCA3-208ENST00000540683 DCTDP32321 178 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 ESRRGP62508 458 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 CBX1P83916 185 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 PAX8Q06710 450 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 GINS1Q14691 196 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 SNAI3Q3KNW1 292 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 KLHL12Q53G59 568 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 GLYATL3Q5SZD4 288 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 OTPQ5XKR4 325 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 C9orf139Q6ZV77 190 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 ZNF771Q7L3S4 317 aaPredicted RBP8.7□□□□□ -1.02
CDCA3-208ENST00000540683 DOK3Q7L591 496 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 SLC36A1Q7Z2H8 476 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 C10orf67Q8IYJ2 551 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 CMTM4Q8IZR5 234 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 PARP8Q8N3A8 854 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 DEFB108BQ8NET1 73 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 OR56B2PQ8NGI1 322 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 OR4Q3Q8NH05 313 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 OTOSQ8NHW6 89 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 ZNF420Q8TAQ5 688 aaPredicted RBP8.7□□□□□ -1.02
CDCA3-208ENST00000540683 UPRTQ96BW1 309 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 CLPTM1LQ96KA5 538 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 TECTBQ96PL2 329 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 MYCBPQ99417 103 aaPredicted RBP8.7□□□□□ -1.02
CDCA3-208ENST00000540683 NIPSNAP1Q9BPW8 284 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 ABHD6Q9BV23 337 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 MROQ9BYG7 248 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 YIPF3Q9GZM5 350 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 OR51V1Q9H2C8 321 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 PAPOLBQ9NRJ5 636 aaKnown RBP8.7□□□□□ -1.02
CDCA3-208ENST00000540683 OPN4Q9UHM6 478 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 LAMP5Q9UJQ1 280 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.7□□□□□ -1.02
CDCA3-208ENST00000540683 N6AMT1Q9Y5N5 214 aa8.7□□□□□ -1.02
CDCA3-208ENST00000540683 TCRBV3S1A0A5B6 114 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 TMEM89A2RUT3 159 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 H0YL77 283 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 CLDN34H7C241 214 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 P2RY10O00398 339 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 FKBP6O75344 327 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 MTRF1O75570 445 aaKnown RBP8.69□□□□□ -1.02
CDCA3-208ENST00000540683 VENTXO95231 258 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 CFHR2P36980 270 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 OPRL1P41146 370 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 MAP2K3P46734 347 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 ERFP50548 548 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 PSMA6P60900 246 aaKnown RBP8.69□□□□□ -1.02
CDCA3-208ENST00000540683 CDK5Q00535 292 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 MAB21L1Q13394 359 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 PDCD1Q15116 288 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 SNAPC1Q16533 368 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 ZNF829Q3KNS6 432 aaPredicted RBP8.69□□□□□ -1.02
CDCA3-208ENST00000540683 METTL11BQ5VVY1 283 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 WDR25Q64LD2 544 aaPredicted RBP8.69□□□□□ -1.02
CDCA3-208ENST00000540683 C1orf229Q6ZS94 237 aaPredicted RBP8.69□□□□□ -1.02
CDCA3-208ENST00000540683 SLC16A9Q7RTY1 509 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 KRT77Q7Z794 578 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 NAA40Q86UY6 237 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 ZDHHC13Q8IUH4 622 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 OR10S1Q8NGN2 331 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 SGMS2Q8NHU3 365 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 FAM81AQ8TBF8 368 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 THEM6Q8WUY1 208 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 SLC6A7Q99884 636 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 NUDT16L1Q9BRJ7 211 aaKnown RBP8.69□□□□□ -1.02
CDCA3-208ENST00000540683 PAPOLGQ9BWT3 736 aaKnown RBP8.69□□□□□ -1.02
CDCA3-208ENST00000540683 DNTTIP1Q9H147 329 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 SLC25A19Q9HC21 320 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 UFSP2Q9NUQ7 469 aa8.69□□□□□ -1.02
CDCA3-208ENST00000540683 CAB39Q9Y376 341 aaPredicted RBP8.69□□□□□ -1.02
CDCA3-208ENST00000540683 A0A1B0GUS0 222 aa8.68□□□□□ -1.02
CDCA3-208ENST00000540683 NKX6-3A6NJ46 265 aa8.68□□□□□ -1.02
CDCA3-208ENST00000540683 SLC22A31A6NKX4 558 aa8.68□□□□□ -1.02
CDCA3-208ENST00000540683 TRAPPC2LH3BP13 241 aa8.68□□□□□ -1.02
CDCA3-208ENST00000540683 GSC2O15499 205 aa8.68□□□□□ -1.02
CDCA3-208ENST00000540683 AVPP01185 164 aa8.68□□□□□ -1.02
CDCA3-208ENST00000540683 GRPP07492 148 aa8.68□□□□□ -1.02
CDCA3-208ENST00000540683 PRTN3P24158 256 aa8.68□□□□□ -1.02
CDCA3-208ENST00000540683 PSMB10P40306 273 aa8.68□□□□□ -1.02
CDCA3-208ENST00000540683 GSK3AP49840 483 aa8.68□□□□□ -1.02
CDCA3-208ENST00000540683 ZNF121P58317 390 aaPredicted RBP8.68□□□□□ -1.02
CDCA3-208ENST00000540683 RPL15P61313 204 aaKnown RBP8.68□□□□□ -1.02
CDCA3-208ENST00000540683 IL13RA1P78552 427 aa8.68□□□□□ -1.02
CDCA3-208ENST00000540683 FAM3AP98173 230 aa8.68□□□□□ -1.02
CDCA3-208ENST00000540683 PPP1R8Q12972 351 aaKnown RBP8.68□□□□□ -1.02
CDCA3-208ENST00000540683 BAMBIQ13145 260 aa8.68□□□□□ -1.02
CDCA3-208ENST00000540683 SPRNQ5BIV9 151 aa8.68□□□□□ -1.02
CDCA3-208ENST00000540683 ZBTB37Q5TC79 503 aa8.68□□□□□ -1.02
CDCA3-208ENST00000540683 LINC01590Q5TEZ4 76 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms