RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 OR4A4PQ8NGN8 299 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 ROBO4Q8WZ75 1007 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 SPACA5Q96QH8 159 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 TLNRD1Q9H1K6 362 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 DUSP15Q9H1R2 295 aaPredicted RBP10.88□□□□□ -0.67
NPC1-202ENST00000540608 B3GAT1Q9P2W7 334 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 MLXQ9UH92 298 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 VDAC3Q9Y277 283 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 LHFPL6Q9Y693 200 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 A0A1B0GX78 115 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 LMO7DNF2Z398 122 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 FOSL2P15408 326 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 FPR2P25090 351 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 HOXA1P49639 335 aaPredicted RBP10.88□□□□□ -0.67
NPC1-202ENST00000540608 SLC9A3R2Q15599 337 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 FAM189A2Q15884 450 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 MST1LQ2TV78 715 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 TMPRSS9Q7Z410 1059 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 PEG10Q86TG7 708 aaKnown RBP10.88□□□□□ -0.67
NPC1-202ENST00000540608 NUBPLQ8TB37 319 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 AQP10Q96PS8 301 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 RTBDNQ9BSG5 229 aaPredicted RBP10.88□□□□□ -0.67
NPC1-202ENST00000540608 ADAT1Q9BUB4 502 aaKnown RBP10.88□□□□□ -0.67
NPC1-202ENST00000540608 SEC11CQ9BY50 192 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 LMAN1LQ9HAT1 526 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 ASXL3Q9C0F0 2248 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 IGHV3-20A0A0C4DH32 117 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 ZNF878C9JN71 531 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 ZNF354AO60765 605 aaPredicted RBP10.87□□□□□ -0.67
NPC1-202ENST00000540608 ADAP1O75689 374 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 RAD51DO75771 328 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 SNAPINO95295 136 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 OR3A4PP47883 348 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 SUPT4H1P63272 117 aaKnown RBP10.87□□□□□ -0.67
NPC1-202ENST00000540608 PJVKQ0ZLH3 352 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 FOXF1Q12946 379 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 SHEQ5VZ18 495 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 H3F3CQ6NXT2 135 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 ZNF585AQ6P3V2 769 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 RAB11FIP2Q7L804 512 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 OR56B1Q8NGI3 324 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 OR2AJ1Q8NGZ0 328 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 WNT2BQ93097 391 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 NUDT22Q9BRQ3 303 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 TMEM59Q9BXS4 323 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 BANF2Q9H503 90 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 OR5AC2Q9NZP5 309 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 ATXN7L1Q9ULK2 861 aaPredicted RBP10.87□□□□□ -0.67
NPC1-202ENST00000540608 MSGN1A6NI15 193 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 H3BML4 177 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 EFNA2O43921 213 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 GIMD1P0DJR0 217 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 MYF5P13349 255 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 PVALBP20472 110 aaPredicted RBP10.87□□□□□ -0.67
NPC1-202ENST00000540608 CBX5P45973 191 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 ABHD12BQ7Z5M8 362 aaPredicted RBP10.87□□□□□ -0.67
NPC1-202ENST00000540608 LHFPL1Q86WI0 220 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 CBLN2Q8IUK8 224 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 OR5H2Q8NGV7 314 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 SAT2Q96F10 170 aaPredicted RBP10.87□□□□□ -0.67
NPC1-202ENST00000540608 TREM1Q9NP99 234 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 UQCC1Q9NVA1 299 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 LPAR3Q9UBY5 353 aa10.87□□□□□ -0.67
NPC1-202ENST00000540608 IGHV1OR21-1A0A087WYE8 117 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 ZNF705EA8MWA4 302 aaPredicted RBP10.86□□□□□ -0.67
NPC1-202ENST00000540608 ETV2O00321 342 aaPredicted RBP10.86□□□□□ -0.67
NPC1-202ENST00000540608 MFNGO00587 321 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 ZNF17P17021 662 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 CSNK1EP49674 416 aaKnown RBP10.86□□□□□ -0.67
NPC1-202ENST00000540608 CLRN1P58418 232 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 ANKRD55Q3KP44 614 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 SHISA6Q6ZSJ9 500 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 COMMD2Q86X83 199 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 PLXDC1Q8IUK5 500 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 OR8B12Q8NGG6 310 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 ARHGAP5-AS1Q96IT6 56 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 C2orf50Q96LR7 162 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 SOX7Q9BT81 388 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 SLC26A1Q9H2B4 701 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 SEC61A2Q9H9S3 476 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 GPR84Q9NQS5 396 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 DNAJB11Q9UBS4 358 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 FER1L5A0AVI2 2057 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 SHISA8B8ZZ34 492 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 ZNF121P58317 390 aaPredicted RBP10.86□□□□□ -0.67
NPC1-202ENST00000540608 HNRNPKP61978 463 aaKnown RBP eCLIP10.86□□□□□ -0.67
NPC1-202ENST00000540608 Q7L0L9 218 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 UEVLDQ8IX04 471 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 APCDD1LQ8NCL9 501 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 BHLHE23Q8NDY6 225 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 OR13G1Q8NGZ3 307 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 OR10C1Q96KK4 312 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 URM1Q9BTM9 101 aaKnown RBP10.86□□□□□ -0.67
NPC1-202ENST00000540608 SLC5A7Q9GZV3 580 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 ZNF319Q9P2F9 582 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 POLR1DQ9Y2S0 133 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 MTCH2Q9Y6C9 303 aa10.86□□□□□ -0.67
NPC1-202ENST00000540608 PHF3Q92576 2039 aaKnown RBP10.85□□□□□ -0.67
NPC1-202ENST00000540608 ABCA7Q8IZY2 2146 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 CSTBP04080 98 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms