RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 DDOSTP39656 456 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 MDH2P40926 338 aaKnown RBP12.63□□□□□ -0.39
UBE3B-212ENST00000540230 ALDH3A2P51648 485 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 ROM1Q03395 351 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 MFGE8Q08431 387 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-212ENST00000540230 OR8B8Q15620 311 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 KCTD18Q6PI47 426 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-212ENST00000540230 PLEKHG7Q6ZR37 379 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 ZNF826PQ6ZT77 177 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 GID4Q8IVV7 300 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 ZNF679Q8IYX0 411 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 FAM81AQ8TBF8 368 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 Q8TCH9 128 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 EME1Q96AY2 570 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 RAB3IPQ96QF0 476 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-212ENST00000540230 MBOAT4Q96T53 435 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 TBX5Q99593 518 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 SLC29A1Q99808 456 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 APOL4Q9BPW4 351 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 NIPAL2Q9H841 368 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 SP140LQ9H930 580 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 HAO2Q9NYQ3 351 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 RHBDD3Q9Y3P4 386 aa12.63□□□□□ -0.39
UBE3B-212ENST00000540230 TRAV20A0A0B4J274 112 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 IFNL4K9M1U5 179 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 ANPEPP15144 967 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 HNF1AP20823 631 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 FAHD2BQ6P2I3 314 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-212ENST00000540230 DEGS2Q6QHC5 323 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 ZNF322Q6U7Q0 402 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-212ENST00000540230 PQLC1Q8N2U9 271 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 KLHL36Q8N4N3 616 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 SPICQ8N5J4 248 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 OR8J1Q8NGP2 316 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 FAHD2AQ96GK7 314 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 TMEM246Q9BRR3 403 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 TMPRSS13Q9BYE2 586 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 MROQ9BYG7 248 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 FGF23Q9GZV9 251 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-212ENST00000540230 AASSQ9UDR5 926 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 IKZF2Q9UKS7 526 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 PCDHB10Q9UN67 800 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 TMEM269A0A1B0GVZ9 245 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 ANKRD30BLA7E2S9 258 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 SRSF10O75494 262 aaKnown RBP12.62□□□□□ -0.39
UBE3B-212ENST00000540230 GRPP07492 148 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 HTR1FP30939 366 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 SRSF2Q01130 221 aaKnown RBP12.62□□□□□ -0.39
UBE3B-212ENST00000540230 ZNF404Q494X3 552 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 ASB17Q8WXJ9 295 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 HRASLS5Q96KN8 279 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 RGCCQ9H4X1 137 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 METTL17Q9H7H0 456 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-212ENST00000540230 MMP26Q9NRE1 261 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 CLN6Q9NWW5 311 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 MRM2Q9UI43 246 aaKnown RBP12.62□□□□□ -0.39
UBE3B-212ENST00000540230 NOP16Q9Y3C1 178 aaKnown RBP12.62□□□□□ -0.39
UBE3B-212ENST00000540230 TMEM14AQ9Y6G1 99 aa12.62□□□□□ -0.39
UBE3B-212ENST00000540230 PPIAL4EA0A075B759 164 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 LRRC30A6NM36 301 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 PPIAL4DF5H284 164 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 TRAPPC2LH3BP13 241 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 PHF1O43189 567 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-212ENST00000540230 IGLV3-1P01715 115 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 PPIAL4FP0DN26 164 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 CFL1P23528 166 aaKnown RBP12.61□□□□□ -0.39
UBE3B-212ENST00000540230 CD80P33681 288 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 RIDAP52758 137 aaKnown RBP12.61□□□□□ -0.39
UBE3B-212ENST00000540230 CSNK2BP67870 215 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 LYPD2Q6UXB3 125 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 C11orf53Q8IXP5 236 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 C1orf87Q8N0U7 546 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 MUC20Q8N307 709 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-212ENST00000540230 DEFB108BQ8NET1 73 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 ERGIC1Q969X5 290 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 PAPOLGQ9BWT3 736 aaKnown RBP12.61□□□□□ -0.39
UBE3B-212ENST00000540230 PBOV1Q9GZY1 135 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 FN3KRPQ9HA64 309 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 C1orf123Q9NWV4 160 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 WARS2Q9UGM6 360 aaKnown RBP12.61□□□□□ -0.39
UBE3B-212ENST00000540230 PPIAL4AQ9Y536 164 aa12.61□□□□□ -0.39
UBE3B-212ENST00000540230 LOC105371242A0A075B767 164 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 A6NLC8 198 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 ZNF670-ZNF695F2Z2N8 137 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 C3orf80F5H4A9 247 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 ZNF254O75437 659 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 IFNA2P01563 188 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 WNT2P09544 360 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 IRF2P14316 349 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 EGR1P18146 543 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 PCMT1P22061 227 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 DCTDP32321 178 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 SRP14P37108 136 aaKnown RBP12.6□□□□□ -0.39
UBE3B-212ENST00000540230 CDC42P60953 191 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 ZNF154Q13106 437 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 DMRTC1Q5HYR2 192 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 DCAF12L2Q5VW00 463 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 SFRP4Q6FHJ7 346 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-212ENST00000540230 KLBQ86Z14 1044 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 GCSAMQ8N6F7 178 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms