RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 DAZAP2Q15038 168 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 OR8B8Q15620 311 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 Q499Y3 187 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TMEM255AQ5JRV8 349 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 RGS7BPQ6MZT1 257 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 UNQ9370/PRO34162Q6UXP9 181 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ZNF295-AS1Q8N0V1 137 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TMEM171Q8WVE6 324 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TSEN15Q8WW01 171 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 NEUROG1Q92886 237 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TMEM204Q9BSN7 226 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 OPA3Q9H6K4 179 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TUBG2Q9NRH3 451 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 CA10Q9NS85 328 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 POU2F3Q9UKI9 436 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 FZR1Q9UM11 496 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 V9GYS6 101 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ANKHD1Q8IWZ3 2542 aaKnown RBP16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 PDZD2O15018 2839 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TRDV1A0A1B0GX56 115 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 LOC390937A0A1W2PQ73 354 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 DPPA5A6NC42 116 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ZNF879B4DU55 563 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 H3BSA7 217 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 MTRF1O75570 445 aaKnown RBP16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 RGS9O75916 674 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 SERPINA3P01011 423 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 FABP6P51161 128 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 PSG7Q13046 419 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ZNF718Q3SXZ3 478 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 SLC16A12Q6ZSM3 486 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ANKRD13BQ86YJ7 626 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 CLVS1Q8IUQ0 354 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 OR13C3Q8NGS6 347 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 LILRB1Q8NHL6 650 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TMEM106AQ96A25 262 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 HAVCR1Q96D42 359 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 CHCHD6Q9BRQ6 235 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 EXOSC4Q9NPD3 245 aaKnown RBP16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ZNF275Q9NSD4 429 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 DHDHQ9UQ10 334 aa16.23■□□□□ 0.19
TNFRSF1A-213ENST00000540022 POLQO75417 2590 aa16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 A0A1W2PPK0 400 aa16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 A6NIN4 97 aa16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 PIN1P1O15428 100 aa16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 RAC2P15153 192 aa16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 RPS23P62266 143 aaKnown RBP16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ALKBH6Q3KRA9 238 aa16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ZMAT1Q5H9K5 638 aa16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 FAM27D1Q5T7N8 215 aa16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 MBNL2Q5VZF2 373 aaKnown RBP16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 OR2T2Q6IF00 324 aa16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 CEACAM19Q7Z692 300 aa16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 SEMA6DQ8NFY4 1073 aa16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 OR56B2PQ8NGI1 322 aa16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ORAI1Q96D31 301 aa16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ADAT3Q96EY9 351 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 DERL3Q96Q80 235 aa16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 PPIL3Q9H2H8 161 aaKnown RBP16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ENPP5Q9UJA9 477 aa16.22■□□□□ 0.19
TNFRSF1A-213ENST00000540022 GGT3PA6NGU5 568 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 CD300LBA8K4G0 201 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 E7EQL1 145 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 AIREO43918 545 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ZNF250P15622 560 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 FAHP16930 419 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ZNF12P17014 697 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 GALP22466 123 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 GCH1P30793 250 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 MAP2K3P46734 347 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TIMM50Q3ZCQ8 353 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 LRP11Q86VZ4 500 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 CCDC54Q8NEL0 328 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 FGGYQ96C11 551 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 CENPOQ9BU64 300 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 RNF167Q9H6Y7 350 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ZNF442Q9H7R0 627 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TXNL4BQ9NX01 149 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 KCNN3Q9UGI6 736 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 SSR3Q9UNL2 185 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 PIGLQ9Y2B2 252 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 CEPT1Q9Y6K0 416 aa16.21■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TRBV5-7A0A0A0MS05 114 aa16.2■□□□□ 0.18
TNFRSF1A-213ENST00000540022 LOC100506127A0A0U1RQW1 187 aa16.2■□□□□ 0.18
TNFRSF1A-213ENST00000540022 A6NNC1 897 aa16.2■□□□□ 0.18
TNFRSF1A-213ENST00000540022 LILRA1O75019 489 aa16.2■□□□□ 0.18
TNFRSF1A-213ENST00000540022 GATBO75879 557 aaKnown RBP16.2■□□□□ 0.18
TNFRSF1A-213ENST00000540022 GABARAPO95166 117 aa16.2■□□□□ 0.18
TNFRSF1A-213ENST00000540022 LSM3P62310 102 aaKnown RBP16.2■□□□□ 0.18
TNFRSF1A-213ENST00000540022 C22orf42Q6IC83 251 aa16.2■□□□□ 0.18
TNFRSF1A-213ENST00000540022 SYNPRQ8TBG9 265 aa16.2■□□□□ 0.18
TNFRSF1A-213ENST00000540022 RBM38Q9H0Z9 239 aaKnown RBP16.2■□□□□ 0.18
TNFRSF1A-213ENST00000540022 NOX4Q9NPH5 578 aa16.2■□□□□ 0.18
TNFRSF1A-213ENST00000540022 CMAHPQ9Y471 501 aa16.2■□□□□ 0.18
TNFRSF1A-213ENST00000540022 ANKRD61A6NGH8 418 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 DHRS7CA6NNS2 312 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 CD2P06729 351 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 FGF9P31371 208 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 RIPPLY1Q0D2K3 151 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 ADIPOQQ15848 244 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms