RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 PSRC1Q6PGN9 363 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-211ENST00000539921 TMEM220Q6QAJ8 160 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 GDF7Q7Z4P5 450 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 MDGA2Q7Z553 956 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 DEFB128Q7Z7B8 93 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 TMEM150AQ86TG1 271 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 VASH2Q86V25 355 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 ZNF429Q86V71 674 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 NRMQ8IXM6 262 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 TOP6BLQ8N6T0 577 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 TMEM99Q8N816 258 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 CCDC71LQ8N9Z2 235 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 CYB561A3Q8NBI2 242 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 SIDT2Q8NBJ9 832 aaKnown RBP5.48□□□□□ -1.53
SNHG1-211ENST00000539921 POC1AQ8NBT0 407 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 OR4K1Q8NGD4 311 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 OR52L1Q8NGH7 329 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 OR51L1Q8NGJ5 315 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 ZNF519Q8TB69 540 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 HASPINQ8TF76 798 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 FAM222BQ8WU58 562 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 PTPMT1Q8WUK0 201 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-211ENST00000539921 TSEN15Q8WW01 171 aaKnown RBP5.48□□□□□ -1.53
SNHG1-211ENST00000539921 TMEM169Q96HH4 297 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 PRAP1Q96NZ9 151 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 HIST1H2AAQ96QV6 131 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 MYADMQ96S97 322 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 GFI1Q99684 422 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 ORAI3Q9BRQ5 295 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 CABLES2Q9BTV7 478 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 G6PC3Q9BUM1 346 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 MAP1LC3BQ9GZQ8 125 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 CHST6Q9GZX3 395 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 CHODLQ9H9P2 273 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 Q9N2K0 584 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 ZCCHC3Q9NUD5 404 aaKnown RBP5.48□□□□□ -1.53
SNHG1-211ENST00000539921 TMEM106BQ9NUM4 274 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 SIDT1Q9NXL6 827 aaKnown RBP5.48□□□□□ -1.53
SNHG1-211ENST00000539921 FLRT3Q9NZU0 649 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 TUBD1Q9UJT1 453 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 ZNF223Q9UK11 482 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-211ENST00000539921 RNF150Q9ULK6 438 aa5.48□□□□□ -1.53
SNHG1-211ENST00000539921 SHROOM3Q8TF72 1996 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 PLXNA3P51805 1871 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 THSD7AQ9UPZ6 1657 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 TRAV9-1A0A075B6T8 112 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 A0A087WUU8 490 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 A0A0G2JN53 185 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 LOC100289279A0A1B0GTE1 492 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 CDC14CA4D256 554 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 VSTM2BA6NLU5 285 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 C22orf46C9J442 243 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 J3QW42 95 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 SOCS6O14544 535 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 YY2O15391 372 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 RBFOX2O43251 390 aaKnown RBP eCLIP5.47□□□□□ -1.53
SNHG1-211ENST00000539921 RAMP1O60894 148 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 RCBTB2O95199 551 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 SCGB1D1O95968 90 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 AMY2AP04746 511 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 OR4Q2P0C623 313 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 MPC1LP0DKB6 136 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 ZNF7P17097 686 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-211ENST00000539921 TCN2P20062 427 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 CMPK1P30085 196 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 TM4SF1P30408 202 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 PYCR1P32322 319 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 SRP14P37108 136 aaKnown RBP5.47□□□□□ -1.53
SNHG1-211ENST00000539921 CTRLP40313 264 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 GABRA2P47869 451 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 ZNF41P51814 821 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-211ENST00000539921 SLC25A1P53007 311 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 MTCP1P56278 107 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 TPPP2P59282 170 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 ADAM8P78325 824 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 PAX2Q02962 417 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 COL10A1Q03692 680 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 ZNF85Q03923 595 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 LAMTOR4Q0VGL1 99 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 GPM6BQ13491 265 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 ENDOGQ14249 297 aaKnown RBP5.47□□□□□ -1.53
SNHG1-211ENST00000539921 TTLL4Q14679 1199 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 MLC1Q15049 377 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 NR0B2Q15466 257 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 CPSF6Q16630 551 aaKnown RBP eCLIP5.47□□□□□ -1.53
SNHG1-211ENST00000539921 DUSP5Q16690 384 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 HNRNPA1L2Q32P51 320 aaKnown RBP5.47□□□□□ -1.53
SNHG1-211ENST00000539921 PLPPR5Q32ZL2 321 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 SNAI3Q3KNW1 292 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 DCAF4L1Q3SXM0 396 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 Q499Y3 187 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 LRRC37A5PQ49AS3 106 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 ALG10Q5BKT4 473 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 PIP5KL1Q5T9C9 394 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 SAMD13Q5VXD3 122 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 SPRYD7Q5W111 196 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 FAAP20Q6NZ36 180 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 CDC42EP5Q6NZY7 148 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 STAC2Q6ZMT1 411 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 MBOAT2Q6ZWT7 520 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms