RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 TGM4P49221 684 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 LGALS4P56470 323 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 TIAL1Q01085 375 aaKnown RBP eCLIP6.58□□□□□ -1.36
GNE-205ENST00000539815 KLF10Q13118 480 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 CD226Q15762 336 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 TATDN3Q17R31 274 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 ZNF404Q494X3 552 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 HAGHLQ6PII5 290 aaPredicted RBP6.58□□□□□ -1.36
GNE-205ENST00000539815 ATG4DQ86TL0 474 aaPredicted RBP6.58□□□□□ -1.36
GNE-205ENST00000539815 CATSPERDQ86XM0 798 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 FAM185AQ8N0U4 392 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 KDM8Q8N371 416 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 GDPD1Q8N9F7 314 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 PHYHIPQ92561 330 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 SDF2Q99470 211 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 OCSTAMPQ9BR26 566 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 TMEM208Q9BTX3 173 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 DNTTIP1Q9H147 329 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 ZMAT3Q9HA38 289 aaKnown RBP6.58□□□□□ -1.36
GNE-205ENST00000539815 NANSQ9NR45 359 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 MALRD1Q5VYJ5 2156 aa6.58□□□□□ -1.36
GNE-205ENST00000539815 IGHV3OR16-10A0A075B7F0 116 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 IGHV1-69-2A0A0G2JMI3 117 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 FABP7O15540 132 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 ABHD16AO95870 558 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 CYB5R3P00387 301 aaPredicted RBP6.57□□□□□ -1.36
GNE-205ENST00000539815 LPLP06858 475 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 HTR1AP08908 422 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 LAMP1P11279 417 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 TGFBR2P37173 567 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 PTGDSP41222 190 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 ACTBP60709 375 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 ACTA2P62736 377 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 ACTG2P63267 376 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 ACTC1P68032 377 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 ACTA1P68133 377 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 IKZF1Q13422 519 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 LPCAT3Q6P1A2 487 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 CYP2R1Q6VVX0 501 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 GGNQ86UU5 652 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 FOXRED2Q8IWF2 684 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 NEK7Q8TDX7 302 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 CCDC107Q8WV48 283 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 SLCO4A1Q96BD0 722 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 SEPSECSQ9HD40 501 aaKnown RBP6.57□□□□□ -1.36
GNE-205ENST00000539815 ABCB9Q9NP78 766 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 ZDHHC2Q9UIJ5 367 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 ELOVL7A1L3X0 281 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 OR6C68A6NDL8 312 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 CBY3A6NI87 242 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 SHISA9B4DS77 424 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 OVOL3O00110 214 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 PPP6CO00743 305 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 EREGO14944 169 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 DLEU1O43261 78 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 TPST1O60507 370 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 FZD7O75084 574 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 UGT2B17O75795 530 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 CECR9P0C854 216 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 PRTN3P24158 256 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 GLRXP35754 106 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 RPS5P46782 204 aaKnown RBP6.57□□□□□ -1.36
GNE-205ENST00000539815 B3GALT5-AS1P59052 145 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 TNFAIP6P98066 277 aaPredicted RBP6.57□□□□□ -1.36
GNE-205ENST00000539815 SPOCK1Q08629 439 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 TOMM34Q15785 309 aaPredicted RBP6.57□□□□□ -1.36
GNE-205ENST00000539815 CYP51A1Q16850 503 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 LINGO2Q7L985 606 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 SSX6Q7RTT6 188 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 PXKQ7Z7A4 578 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 LHFPL3Q86UP9 236 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 NAA40Q86UY6 237 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 MEX3DQ86XN8 651 aaKnown RBP6.57□□□□□ -1.36
GNE-205ENST00000539815 OR5L1Q8NGL2 311 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 CLDND2Q8NHS1 167 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 RFT1Q96AA3 541 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 C1orf159Q96HA4 380 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 RCC1LQ96I51 464 aaKnown RBP6.57□□□□□ -1.36
GNE-205ENST00000539815 HYLS1Q96M11 299 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 ZNF583Q96ND8 569 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 TECTBQ96PL2 329 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 TMEM204Q9BSN7 226 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 ADAT1Q9BUB4 502 aaKnown RBP6.57□□□□□ -1.36
GNE-205ENST00000539815 OPA3Q9H6K4 179 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 CYSLTR2Q9NS75 346 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 NOP16Q9Y3C1 178 aaKnown RBP6.57□□□□□ -1.36
GNE-205ENST00000539815 NUP214P35658 2090 aaPredicted RBP6.57□□□□□ -1.36
GNE-205ENST00000539815 PRORSD1PA6NEY8 169 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 C5orf52A6NGY3 159 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 UBE2CO00762 179 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 PHYHO14832 338 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 PRSS23O95084 383 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 IGF2P01344 180 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 PNMTP11086 282 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 COX4I1P13073 169 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 OMGP23515 440 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 PCBD1P61457 104 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 RPS7P62081 194 aaKnown RBP6.57□□□□□ -1.36
GNE-205ENST00000539815 RNF151Q2KHN1 245 aa6.57□□□□□ -1.36
GNE-205ENST00000539815 DDI2Q5TDH0 399 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms