RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 TMEM128Q5BJH2 165 aa17.98■□□□□ 0.47
TMEM260-203ENST00000539559 FAHD2BQ6P2I3 314 aaPredicted RBP17.98■□□□□ 0.47
TMEM260-203ENST00000539559 LANCL3Q6ZV70 420 aa17.98■□□□□ 0.47
TMEM260-203ENST00000539559 FBXO17Q96EF6 278 aa17.98■□□□□ 0.47
TMEM260-203ENST00000539559 KLHDC7BQ96G42 594 aa17.98■□□□□ 0.47
TMEM260-203ENST00000539559 FAHD2AQ96GK7 314 aa17.98■□□□□ 0.47
TMEM260-203ENST00000539559 TRBV6-7A0A0A0MS04 114 aa17.98■□□□□ 0.47
TMEM260-203ENST00000539559 FTCDNL1E5RQL4 147 aa17.98■□□□□ 0.47
TMEM260-203ENST00000539559 BPNT1O95861 308 aa17.98■□□□□ 0.47
TMEM260-203ENST00000539559 AVPI1Q5T686 147 aa17.98■□□□□ 0.47
TMEM260-203ENST00000539559 GRINAQ7Z429 371 aa17.98■□□□□ 0.47
TMEM260-203ENST00000539559 TPSD1Q9BZJ3 242 aa17.98■□□□□ 0.47
TMEM260-203ENST00000539559 GPR27Q9NS67 375 aa17.98■□□□□ 0.47
TMEM260-203ENST00000539559 RCC2Q9P258 522 aaKnown RBP17.98■□□□□ 0.47
TMEM260-203ENST00000539559 FLVCR1Q9Y5Y0 555 aa17.98■□□□□ 0.47
TMEM260-203ENST00000539559 CDAP32320 146 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 MEOX2P50222 304 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 BLKP51451 505 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 TMEM50BP56557 158 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 TGIF1Q15583 401 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 GALNTL5Q7Z4T8 443 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 PNLDC1Q8NA58 520 aaKnown RBP17.97■□□□□ 0.47
TMEM260-203ENST00000539559 RNF133Q8WVZ7 376 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 ARHGAP5-AS1Q96IT6 56 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 FAM71F1Q96KD3 344 aaPredicted RBP17.97■□□□□ 0.47
TMEM260-203ENST00000539559 C5orf34Q96MH7 638 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 SEC61A2Q9H9S3 476 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 GPR132Q9UNW8 380 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 TMEM14DPA8MWL7 114 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 MED6O75586 246 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 SFTPBP07988 381 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 SFTA3P0C7M3 94 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 CX3CR1P49238 355 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 KLHL24Q6TFL4 600 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 NPRL2Q8WTW4 380 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 RAB3CQ96E17 227 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 SEC11CQ9BY50 192 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 ZNF319Q9P2F9 582 aa17.97■□□□□ 0.47
TMEM260-203ENST00000539559 MRPS28Q9Y2Q9 187 aaKnown RBP17.97■□□□□ 0.47
TMEM260-203ENST00000539559 ASCC3Q8N3C0 2202 aaKnown RBP17.97■□□□□ 0.47
TMEM260-203ENST00000539559 SFT2D2O95562 160 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 CD80P33681 288 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 MMP16P51512 607 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 BIDP55957 195 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 FOXK1P85037 733 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 OR2A2Q6IF42 318 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 CLEC9AQ6UXN8 241 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 DTWD2Q8NBA8 298 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 LILRB1Q8NHL6 650 aaPredicted RBP17.96■□□□□ 0.47
TMEM260-203ENST00000539559 SFT2D1Q8WV19 159 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 ZNF775Q96BV0 537 aaPredicted RBP17.96■□□□□ 0.47
TMEM260-203ENST00000539559 KCNK17Q96T54 332 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 RTBDNQ9BSG5 229 aaPredicted RBP17.96■□□□□ 0.47
TMEM260-203ENST00000539559 SMIM3Q9BZL3 60 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 PLA2G2EQ9NZK7 142 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 EIF3GO75821 320 aaKnown RBP eCLIP17.96■□□□□ 0.47
TMEM260-203ENST00000539559 IGHMP01871 453 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 SNRPEP62304 92 aaKnown RBP17.96■□□□□ 0.47
TMEM260-203ENST00000539559 TLE3Q04726 772 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 ABHD12BQ7Z5M8 362 aaPredicted RBP17.96■□□□□ 0.47
TMEM260-203ENST00000539559 OR10H5Q8NGA6 315 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 OR5D14Q8NGL3 314 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 ZNF285Q96NJ3 590 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 MRPS17Q9Y2R5 130 aaKnown RBP17.96■□□□□ 0.47
TMEM260-203ENST00000539559 PCDHGA1Q9Y5H4 931 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 UNC13CQ8NB66 2214 aa17.96■□□□□ 0.47
TMEM260-203ENST00000539559 IGKV3D-11A0A0A0MRZ8 115 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 IGHV1OR15-9A0A0B4J2B8 117 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 KNG1P01042 644 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 ZNF20P17024 532 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 GALNSP34059 522 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 PTGFRP43088 359 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 HSF1Q00613 529 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 NAAAQ02083 359 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 ARFRP1Q13795 201 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 PRSS54Q6PEW0 395 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 RBMS3Q6XE24 437 aaKnown RBP17.95■□□□□ 0.46
TMEM260-203ENST00000539559 OR13G1Q8NGZ3 307 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 TNRC18O15417 2968 aaPredicted RBP17.95■□□□□ 0.46
TMEM260-203ENST00000539559 RNASEK-C17orf49H0YIS7 233 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 CRTAPO75718 401 aaPredicted RBP17.95■□□□□ 0.46
TMEM260-203ENST00000539559 MFAP5Q13361 173 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 CARD17Q5XLA6 110 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 LMX1AQ8TE12 382 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 HLA-CQ95604 372 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 F2RL1P55085 397 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 MYO7BQ6PIF6 2116 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 SLC16A13Q7RTY0 426 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 NANPQ8TBE9 248 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 ADAMTS17Q8TE56 1095 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 SLC5A7Q9GZV3 580 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 POLR1DQ9Y2S0 133 aa17.95■□□□□ 0.46
TMEM260-203ENST00000539559 C5orf63A6NC05 138 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 CDC14BO60729 498 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 HCKP08631 526 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 HIST1H1DP16402 221 aaKnown RBP17.94■□□□□ 0.46
TMEM260-203ENST00000539559 DHPSP49366 369 aaPredicted RBP17.94■□□□□ 0.46
TMEM260-203ENST00000539559 FBXW4P57775 412 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 TAS2R31P59538 309 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 PNLIPRP3Q17RR3 467 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms