RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 GPR6P46095 362 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-206ENST00000539417 MVKQ03426 396 aa13.3□□□□□ -0.28
RPAIN-206ENST00000539417 OR8B8Q15620 311 aa13.3□□□□□ -0.28
RPAIN-206ENST00000539417 C6orf52Q5T4I8 152 aa13.3□□□□□ -0.28
RPAIN-206ENST00000539417 PRAMEF6Q5VXH4 476 aa13.3□□□□□ -0.28
RPAIN-206ENST00000539417 LHFPL3Q86UP9 236 aa13.3□□□□□ -0.28
RPAIN-206ENST00000539417 OR52I1Q8NGK6 324 aa13.3□□□□□ -0.28
RPAIN-206ENST00000539417 RORBQ92753 470 aa13.3□□□□□ -0.28
RPAIN-206ENST00000539417 EGLN1Q9GZT9 426 aa13.3□□□□□ -0.28
RPAIN-206ENST00000539417 FGF23Q9GZV9 251 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-206ENST00000539417 GCM1Q9NP62 436 aa13.3□□□□□ -0.28
RPAIN-206ENST00000539417 NUFIP1Q9UHK0 495 aaKnown RBP13.3□□□□□ -0.28
RPAIN-206ENST00000539417 OR52A1Q9UKL2 312 aa13.3□□□□□ -0.28
RPAIN-206ENST00000539417 GTF2A1LQ9UNN4 478 aa13.3□□□□□ -0.28
RPAIN-206ENST00000539417 RHBDD3Q9Y3P4 386 aa13.3□□□□□ -0.28
RPAIN-206ENST00000539417 ABCA2Q9BZC7 2435 aa13.3□□□□□ -0.28
RPAIN-206ENST00000539417 MTORP42345 2549 aa13.3□□□□□ -0.28
RPAIN-206ENST00000539417 LOC110117498-PIK3R3F6TDL0 507 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 H3BSH0 61 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 ATP6V1G2O95670 118 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 KRT8P05787 483 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 TACSTD2P09758 323 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 OR12D2P58182 307 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 OR8G1Q15617 311 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 MPPED2Q15777 294 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 ODF4Q2M2E3 257 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 TMEM249Q2WGJ8 235 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 ZNF829Q3KNS6 432 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-206ENST00000539417 DMRTC1Q5HYR2 192 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 CLEC9AQ6UXN8 241 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 BIVMQ86UB2 503 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 MOGAT3Q86VF5 341 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 TFAP2CQ92754 450 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 FAM71F1Q96KD3 344 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-206ENST00000539417 Q96MT0 163 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 ADAT1Q9BUB4 502 aaKnown RBP13.29□□□□□ -0.28
RPAIN-206ENST00000539417 SP140LQ9H930 580 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 GPR84Q9NQS5 396 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 MRPS18AQ9NVS2 196 aaKnown RBP13.29□□□□□ -0.28
RPAIN-206ENST00000539417 MRPL15Q9P015 296 aaKnown RBP13.29□□□□□ -0.28
RPAIN-206ENST00000539417 GNG8Q9UK08 70 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 CSPG4Q6UVK1 2322 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 SVEP1Q4LDE5 3571 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 A0A1B0GTI1 187 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 DAPL1A0PJW8 107 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 H0YAE9 185 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 P2RY10O00398 339 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 FAM20BO75063 409 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 IGHA1P01876 353 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 IGHV4-31P0DP07 118 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 TNFSF4P23510 183 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 KIR3DL2P43630 455 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 TMEM33P57088 247 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 HFEQ30201 348 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 CDONQ4KMG0 1287 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 WDR86Q86TI4 376 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 CATSPERDQ86XM0 798 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 PRSS35Q8N3Z0 413 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 ACBD7Q8N6N7 88 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 CLDND2Q8NHS1 167 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 OPA3Q9H6K4 179 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 ISG20L2Q9H9L3 353 aaKnown RBP13.29□□□□□ -0.28
RPAIN-206ENST00000539417 TMEM106BQ9NUM4 274 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 WIPI2Q9Y4P8 454 aa13.29□□□□□ -0.28
RPAIN-206ENST00000539417 A0A0U1RQV5 110 aa13.28□□□□□ -0.28
RPAIN-206ENST00000539417 ACOD1A6NK06 481 aa13.28□□□□□ -0.28
RPAIN-206ENST00000539417 C3orf80F5H4A9 247 aa13.28□□□□□ -0.28
RPAIN-206ENST00000539417 LMX1BO60663 402 aa13.28□□□□□ -0.28
RPAIN-206ENST00000539417 SULT1C4O75897 302 aa13.28□□□□□ -0.28
RPAIN-206ENST00000539417 ZNF205O95201 554 aa13.28□□□□□ -0.28
RPAIN-206ENST00000539417 CYB5R3P00387 301 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-206ENST00000539417 CD200P41217 278 aa13.28□□□□□ -0.28
RPAIN-206ENST00000539417 RIPK1Q13546 671 aa13.28□□□□□ -0.28
RPAIN-206ENST00000539417 WDR38Q5JTN6 314 aa13.28□□□□□ -0.28
RPAIN-206ENST00000539417 FAM201AQ5SY85 155 aa13.28□□□□□ -0.28
RPAIN-206ENST00000539417 ELMOD2Q8IZ81 293 aa13.28□□□□□ -0.28
RPAIN-206ENST00000539417 FBLIM1Q8WUP2 373 aa13.28□□□□□ -0.28
RPAIN-206ENST00000539417 RGCCQ9H4X1 137 aa13.28□□□□□ -0.28
RPAIN-206ENST00000539417 UFSP2Q9NUQ7 469 aa13.28□□□□□ -0.28
RPAIN-206ENST00000539417 PPP1R3CQ9UQK1 317 aa13.28□□□□□ -0.28
RPAIN-206ENST00000539417 RPL36Q9Y3U8 105 aaKnown RBP13.28□□□□□ -0.28
RPAIN-206ENST00000539417 TLN2Q9Y4G6 2542 aa13.27□□□□□ -0.28
RPAIN-206ENST00000539417 A6NIN4 97 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 SNTNA6NMZ2 147 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 ANKRD30BLA7E2S9 258 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 CLDN25C9JDP6 229 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 J3QLW9 94 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 XPNPEP2O43895 674 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 LIMS3P0CW19 117 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 LIMS4P0CW20 117 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 ZNF19P17023 458 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 DDOSTP39656 456 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 NANOS3P60323 173 aaKnown RBP13.27□□□□□ -0.29
RPAIN-206ENST00000539417 ACTC1P68032 377 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 ACTA1P68133 377 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 RAB40BQ12829 278 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 IL18R1Q13478 541 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 BCL2L15Q5TBC7 163 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 RDH10Q8IZV5 341 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 ZNF540Q8NDQ6 660 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms