RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 FIGNL2A6NMB9 653 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 ST8SIA5O15466 376 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 YIF1AO95070 293 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 ITGA3P26006 1051 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 S100A2P29034 98 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 IGLV3-21P80748 117 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 KIAA0141Q14154 515 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 C1QL3Q5VWW1 255 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 RD3Q7Z3Z2 195 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 LHFPL1Q86WI0 220 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 DNAJA3Q96EY1 480 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 CHST5Q9GZS9 411 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 PARP12Q9H0J9 701 aaKnown RBP16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 PPP4R1LQ9P1A2 415 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 CXCR1P25024 350 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 TOMM34Q15785 309 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 HEPN1Q6WQI6 88 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 COX15Q7KZN9 410 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 OR5H2Q8NGV7 314 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 OR14C36Q8NHC7 312 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 GTF3AQ92664 365 aaKnown RBP16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 ELSPBP1Q96BH3 223 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 ZDHHC12Q96GR4 267 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 KLHDC3Q9BQ90 382 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 SLC2A4RGQ9NR83 387 aa16.51■□□□□ 0.23
SFSWAP-207ENST00000538548 LOC101059948A0A1B0GTJ6 334 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 IFITM10A6NMD0 228 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 NME2P1O60361 137 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 DANCRP0C864 163 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 ZNF616Q08AN1 781 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 YPEL4Q96NS1 127 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 LPAR5Q9H1C0 372 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 KCNJ16Q9NPI9 418 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 LUZP4Q9P127 313 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 ARID1AO14497 2285 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 GPR37O15354 613 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 SLC31A1O15431 190 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 PRKNO60260 465 aaPredicted RBP16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 MPZL1O95297 269 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 MT-ATP6P00846 226 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 RNH1P13489 461 aaKnown RBP16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 CRABP1P29762 137 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 ZNF383Q8NA42 475 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 PNLDC1Q8NA58 520 aaKnown RBP16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 CD300LFQ8TDQ1 290 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 RHBDD1Q8TEB9 315 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 SLAMF9Q96A28 289 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 SLC25A36Q96CQ1 311 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 S100A13Q99584 98 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 SLC35B3Q9H1N7 401 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 GAR1Q9NY12 217 aaKnown RBP16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 COA3Q9Y2R0 106 aaPredicted RBP16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 HDGFL3Q9Y3E1 203 aa16.5■□□□□ 0.23
SFSWAP-207ENST00000538548 A0A0J9YY10 115 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 A6NCN8 305 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 HIST1H1DP16402 221 aaKnown RBP16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 RPS23P62266 143 aaKnown RBP16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 IAH1Q2TAA2 248 aaPredicted RBP16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 PLAC9Q5JTB6 97 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 AADACL3Q5VUY0 350 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 DCXRQ7Z4W1 244 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 ZNF101Q8IZC7 436 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 OR13G1Q8NGZ3 307 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 PRRX2Q99811 253 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 ARV1Q9H2C2 271 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 PARPBPQ9NWS1 579 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 PRODH2Q9UF12 536 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 OSGIN2Q9Y236 505 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 ZNF354AO60765 605 aaPredicted RBP16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 DEDDO75618 318 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 SEC11BP0C7V7 166 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 POMZP3Q6PJE2 187 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 DEGS2Q6QHC5 323 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 AKR7LQ8NHP1 331 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 ST7LQ8TDW4 575 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 ADAT3Q96EY9 351 aaPredicted RBP16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 SMIM3Q9BZL3 60 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 PRTFDC1Q9NRG1 225 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 CLDN16Q9Y5I7 305 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 CACNA1IQ9P0X4 2223 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 A0A0A6YYD4 124 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 HCRTR1O43613 425 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 OR2C1O95371 312 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 UTS2O95399 124 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 LY86O95711 162 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 ZNF823P16415 610 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 GLRA1P23415 457 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 SLC6A8P48029 635 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 MMP16P51512 607 aa16.49■□□□□ 0.23
SFSWAP-207ENST00000538548 IL33O95760 270 aa16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 ZNF93P35789 620 aaPredicted RBP16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 RAP1AP62834 184 aa16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 OR5D14Q8NGL3 314 aa16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 C14orf144Q96I85 54 aa16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 GNRHR2Q96P88 292 aa16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 PBDC1Q9BVG4 233 aa16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 C1orf123Q9NWV4 160 aa16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 GFOD1Q9NXC2 390 aa16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 PLRG1O43660 514 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms