RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 BCL2L1Q07817 233 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 ELOCQ15369 112 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 RPEL1Q2QD12 228 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 OLFML2AQ68BL7 652 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 C22orf39Q6P5X5 142 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 ZNF613Q6PF04 617 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 FAM183BPQ6ZVS7 135 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 USP43Q70EL4 1123 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 ZNF571Q7Z3V5 609 aaPredicted RBP6.81□□□□□ -1.32
CD9-207ENST00000538418 SNX20Q7Z614 316 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 HIPK1Q86Z02 1210 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 TRAM1L1Q8N609 369 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 AGAP11Q8TF27 550 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 TSSK3Q96PN8 268 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 KLF6Q99612 283 aaPredicted RBP6.81□□□□□ -1.32
CD9-207ENST00000538418 RARRES2Q99969 163 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 OR12D3Q9UGF7 316 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 DNAJC12Q9UKB3 198 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 ING4Q9UNL4 249 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 RCL1Q9Y2P8 373 aaKnown RBP6.81□□□□□ -1.32
CD9-207ENST00000538418 U3KQA8 63 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 HECTD1Q9ULT8 2610 aa6.81□□□□□ -1.32
CD9-207ENST00000538418 SHROOM3Q8TF72 1996 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 IGHV1OR15-1A0A075B7D0 117 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 A0A1B0GU03 582 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 HCRTR1O43613 425 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 DUSP14O95147 198 aaKnown RBP6.8□□□□□ -1.32
CD9-207ENST00000538418 HOXC4P09017 264 aaPredicted RBP6.8□□□□□ -1.32
CD9-207ENST00000538418 PGAM2P15259 253 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 CXCR2P25025 360 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 AQP2P41181 271 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 ATP5J2P56134 94 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 PAX8Q06710 450 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 ECH1Q13011 328 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 PDIA2Q13087 525 aaKnown RBP6.8□□□□□ -1.32
CD9-207ENST00000538418 TGIF1Q15583 401 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 TSC22D1Q15714 1073 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 USF2Q15853 346 aaPredicted RBP6.8□□□□□ -1.32
CD9-207ENST00000538418 LRRC36Q1X8D7 754 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 PTPN20Q4JDL3 420 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 OR2AP1Q8NGE2 309 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 SUN5Q8TC36 379 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 SLC25A38Q96DW6 304 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 ACP6Q9NPH0 428 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 IL26Q9NPH9 171 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 ADA2Q9NZK5 511 aa6.8□□□□□ -1.32
CD9-207ENST00000538418 GLYATL1P3A0A0U1RQE8 302 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 RAB19A4D1S5 217 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 A6NIZ1 184 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 IQCF5A8MTL0 148 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 SHISA9B4DS77 424 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 K7N7A8 449 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 SCAMP2O15127 329 aaKnown RBP6.79□□□□□ -1.32
CD9-207ENST00000538418 PRB1P04280 392 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 AQP1P29972 269 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 NTSP30990 170 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 KLK7P49862 253 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 CLDN6P56747 220 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 STX17P56962 302 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 RAP1BP61224 184 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 CD47Q08722 323 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 VAMP3Q15836 100 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 TRMT5Q32P41 509 aaKnown RBP6.79□□□□□ -1.32
CD9-207ENST00000538418 NDUFAF7Q7L592 441 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 STRADAQ7RTN6 431 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 GKN2Q86XP6 184 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 ZBED8Q8IZ13 594 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 CADM2Q8N3J6 435 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 LMX1AQ8TE12 382 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 KLK6Q92876 244 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 NTAN1Q96AB6 310 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 FGGYQ96C11 551 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 HIST1H4GQ99525 98 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 NAT9Q9BTE0 207 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 CHID1Q9BWS9 393 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 CLMPQ9H6B4 373 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 TREM2Q9NZC2 230 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 APOBEC3BQ9UH17 382 aaKnown RBP6.79□□□□□ -1.32
CD9-207ENST00000538418 GOLT1BQ9Y3E0 138 aa6.79□□□□□ -1.32
CD9-207ENST00000538418 LRRK2Q5S007 2527 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 TRPM6Q9BX84 2022 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 A0A1W2PQ67 120 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 CENPXA8MT69 81 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 RAD51BO15315 384 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 GMDSO60547 372 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 SLC19A2O60779 497 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 EIF3GO75821 320 aaKnown RBP eCLIP6.78□□□□□ -1.32
CD9-207ENST00000538418 TNFSF15O95150 251 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 CTSEP14091 401 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 SDC4P31431 198 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 CSNK1DP48730 415 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 UGT2B15P54855 530 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 STXBP1P61764 594 aaKnown RBP6.78□□□□□ -1.32
CD9-207ENST00000538418 ASAH1Q13510 395 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 GABRA6Q16445 453 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 OR2B11Q5JQS5 317 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 PPP1R2P3Q6NXS1 205 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 GUSBP11Q6P575 273 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 C2orf66Q6UXQ4 117 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 SLC35D2Q76EJ3 337 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms