RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 MEGF8Q7Z7M0 2845 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 A0A1B0GUS0 222 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 TCRBV5S2A0A599 114 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 ARRDC5A6NEK1 342 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 ZNF879B4DU55 563 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 C22orf46C9J442 243 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 H3BN98 237 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 TMPRSS2O15393 492 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 TBX1O43435 398 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 TOX4O94842 621 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 RAP2AP10114 183 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 SLC2A1P11166 492 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 CALB2P22676 271 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 GNALP38405 381 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 PDCD1Q15116 288 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 SFRP4Q6FHJ7 346 aaPredicted RBP10.91□□□□□ -0.66
RTN3-207ENST00000536011 C16orf87Q6PH81 154 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 CD300LDQ6UXZ3 194 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 SPATC1Q76KD6 591 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 SHFQ7M4L6 423 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 ERI1Q8IV48 349 aaKnown RBP10.91□□□□□ -0.66
RTN3-207ENST00000536011 C19orf18Q8NEA5 215 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 CSNK2A3Q8NEV1 391 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 OR10G2Q8NGC3 310 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 OR4Q3Q8NH05 313 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 ZNRF4Q8WWF5 429 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 GATAD2BQ8WXI9 593 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 NSL1Q96IY1 281 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 FAM71F1Q96KD3 344 aaPredicted RBP10.91□□□□□ -0.66
RTN3-207ENST00000536011 PCGF1Q9BSM1 259 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 OR10A2Q9H208 303 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 RGCCQ9H4X1 137 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 ABCB9Q9NP78 766 aa10.91□□□□□ -0.66
RTN3-207ENST00000536011 TRRAPQ9Y4A5 3859 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 ANXA2P2A6NMY6 339 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 SRRM5B3KS81 715 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 HOXA3O43365 443 aaPredicted RBP10.9□□□□□ -0.66
RTN3-207ENST00000536011 CRYBA1P05813 215 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 MUC1P15941 1255 aaPredicted RBP10.9□□□□□ -0.66
RTN3-207ENST00000536011 GSTT1P30711 240 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 CFHR2P36980 270 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 NAA10P41227 235 aaPredicted RBP10.9□□□□□ -0.66
RTN3-207ENST00000536011 MICBQ29980 383 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 BRD3OSQ6XYD6 125 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 SLC16A9Q7RTY1 509 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 DPY19L4Q7Z388 723 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.9□□□□□ -0.66
RTN3-207ENST00000536011 TMEM86BQ8N661 226 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 OR6N2Q8NGY6 317 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 RNF133Q8WVZ7 376 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 OTULINQ96BN8 352 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 ASB9Q96DX5 294 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 REEP6Q96HR9 211 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 TEX12Q9BXU0 123 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 SLITRK2Q9H156 845 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 PRDM13Q9H4Q3 707 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 MARCH7Q9H992 704 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 RNPEPL1Q9HAU8 725 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 CTSZQ9UBR2 303 aa10.9□□□□□ -0.66
RTN3-207ENST00000536011 GLCEO94923 617 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 GYPAP02724 150 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 H2BFMP0C1H6 154 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 CLUP10909 449 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 PSKH1P11801 424 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 GYS2P54840 703 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 RPL15P61313 204 aaKnown RBP10.89□□□□□ -0.67
RTN3-207ENST00000536011 FAM3AP98173 230 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 IL5RAQ01344 420 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 PPP1R8Q12972 351 aaKnown RBP10.89□□□□□ -0.67
RTN3-207ENST00000536011 DEFB112Q30KQ8 113 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 TEX36Q5VZQ5 186 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 SLC36A1Q7Z2H8 476 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 GCSAMQ8N6F7 178 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 OR4F5Q8NH21 305 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 GIPC3Q8TF64 312 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 SSMEM1Q8WWF3 244 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 TMIGD2Q96BF3 282 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 C12orf43Q96C57 262 aaKnown RBP10.89□□□□□ -0.67
RTN3-207ENST00000536011 CCDC124Q96CT7 223 aaKnown RBP10.89□□□□□ -0.67
RTN3-207ENST00000536011 PGAM5Q96HS1 289 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 WDFY2Q96P53 400 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 FEVQ99581 238 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 MICU1Q9BPX6 476 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 ABHD6Q9BV23 337 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 PAPOLGQ9BWT3 736 aaKnown RBP10.89□□□□□ -0.67
RTN3-207ENST00000536011 ZNF556Q9HAH1 456 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 KAAG1Q9UBP8 84 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 ZNF391Q9UJN7 358 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 POMT1Q9Y6A1 747 aa10.89□□□□□ -0.67
RTN3-207ENST00000536011 hCG_38984A0A1B0GV85 526 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 MDFIC2A0A1B0GVS7 189 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 PRR23D1E9PI22 279 aaPredicted RBP10.88□□□□□ -0.67
RTN3-207ENST00000536011 GNGT2O14610 69 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 TNFRSF13BO14836 293 aaPredicted RBP10.88□□□□□ -0.67
RTN3-207ENST00000536011 CST1P01037 141 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 LHBP01229 141 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 SFTPBP07988 381 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 PRR23D2P0DMB1 279 aaPredicted RBP10.88□□□□□ -0.67
RTN3-207ENST00000536011 OPRL1P41146 370 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 GSK3AP49840 483 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms