RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 PPP1R3CQ9UQK1 317 aa13.77□□□□□ -0.21
ATL3-202ENST00000535789 CD300LBA8K4G0 201 aa13.76□□□□□ -0.21
ATL3-202ENST00000535789 PRODHO43272 600 aa13.76□□□□□ -0.21
ATL3-202ENST00000535789 ENTPD6O75354 484 aa13.76□□□□□ -0.21
ATL3-202ENST00000535789 ZNF205O95201 554 aa13.76□□□□□ -0.21
ATL3-202ENST00000535789 NAA10P41227 235 aaPredicted RBP13.76□□□□□ -0.21
ATL3-202ENST00000535789 BLVRAP53004 296 aa13.76□□□□□ -0.21
ATL3-202ENST00000535789 SLC3A1Q07837 685 aa13.76□□□□□ -0.21
ATL3-202ENST00000535789 SMN1Q16637 294 aaKnown RBP13.76□□□□□ -0.21
ATL3-202ENST00000535789 C6orf141Q5SZD1 244 aa13.76□□□□□ -0.21
ATL3-202ENST00000535789 MRPL21Q7Z2W9 205 aaKnown RBP13.76□□□□□ -0.21
ATL3-202ENST00000535789 PHC2Q8IXK0 858 aa13.76□□□□□ -0.21
ATL3-202ENST00000535789 OR56B2PQ8NGI1 322 aa13.76□□□□□ -0.21
ATL3-202ENST00000535789 OTOSQ8NHW6 89 aa13.76□□□□□ -0.21
ATL3-202ENST00000535789 SPSB4Q96A44 273 aa13.76□□□□□ -0.21
ATL3-202ENST00000535789 RAB39BQ96DA2 213 aa13.76□□□□□ -0.21
ATL3-202ENST00000535789 PPP1R3EQ9H7J1 279 aa13.76□□□□□ -0.21
ATL3-202ENST00000535789 TRAV20A0A0B4J274 112 aa13.75□□□□□ -0.21
ATL3-202ENST00000535789 HNF1AP20823 631 aa13.75□□□□□ -0.21
ATL3-202ENST00000535789 CA6P23280 308 aa13.75□□□□□ -0.21
ATL3-202ENST00000535789 CD200P41217 278 aa13.75□□□□□ -0.21
ATL3-202ENST00000535789 GATA4P43694 442 aa13.75□□□□□ -0.21
ATL3-202ENST00000535789 HCCSP53701 268 aa13.75□□□□□ -0.21
ATL3-202ENST00000535789 MALLQ13021 153 aa13.75□□□□□ -0.21
ATL3-202ENST00000535789 MPPED2Q15777 294 aa13.75□□□□□ -0.21
ATL3-202ENST00000535789 KRTAP24-1Q3LI83 254 aa13.75□□□□□ -0.21
ATL3-202ENST00000535789 MEDAGQ5VYS4 303 aa13.75□□□□□ -0.21
ATL3-202ENST00000535789 NXNL2Q5VZ03 156 aa13.75□□□□□ -0.21
ATL3-202ENST00000535789 LRRC28Q86X40 367 aaPredicted RBP13.75□□□□□ -0.21
ATL3-202ENST00000535789 RFLNBQ8N5W9 214 aa13.75□□□□□ -0.21
ATL3-202ENST00000535789 TMEM100Q9NV29 134 aa13.75□□□□□ -0.21
ATL3-202ENST00000535789 CLN6Q9NWW5 311 aa13.75□□□□□ -0.21
ATL3-202ENST00000535789 N6AMT1Q9Y5N5 214 aa13.75□□□□□ -0.21
ATL3-202ENST00000535789 hCG_38984A0A1B0GV85 526 aa13.74□□□□□ -0.21
ATL3-202ENST00000535789 CEACAM18A8MTB9 384 aa13.74□□□□□ -0.21
ATL3-202ENST00000535789 SLC1A7O00341 560 aa13.74□□□□□ -0.21
ATL3-202ENST00000535789 PTBP3O95758 552 aaKnown RBP13.74□□□□□ -0.21
ATL3-202ENST00000535789 PNPP00491 289 aa13.74□□□□□ -0.21
ATL3-202ENST00000535789 IFNA2P01563 188 aa13.74□□□□□ -0.21
ATL3-202ENST00000535789 SBK2P0C263 348 aa13.74□□□□□ -0.21
ATL3-202ENST00000535789 PAICSP22234 425 aaKnown RBP13.74□□□□□ -0.21
ATL3-202ENST00000535789 ZNF121P58317 390 aaPredicted RBP13.74□□□□□ -0.21
ATL3-202ENST00000535789 CXCR4P61073 352 aa13.74□□□□□ -0.21
ATL3-202ENST00000535789 GRB2P62993 217 aaKnown RBP13.74□□□□□ -0.21
ATL3-202ENST00000535789 LCN2P80188 198 aa13.74□□□□□ -0.21
ATL3-202ENST00000535789 APOFQ13790 326 aa13.74□□□□□ -0.21
ATL3-202ENST00000535789 TMEM155Q4W5P6 130 aa13.74□□□□□ -0.21
ATL3-202ENST00000535789 WDR86Q86TI4 376 aa13.74□□□□□ -0.21
ATL3-202ENST00000535789 ADAT1Q9BUB4 502 aaKnown RBP13.74□□□□□ -0.21
ATL3-202ENST00000535789 PATZ1Q9HBE1 687 aaKnown RBP13.74□□□□□ -0.21
ATL3-202ENST00000535789 PLCXD1Q9NUJ7 323 aa13.74□□□□□ -0.21
ATL3-202ENST00000535789 OPN4Q9UHM6 478 aa13.74□□□□□ -0.21
ATL3-202ENST00000535789 LOC105371242A0A075B767 164 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 XPNPEP2O43895 674 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 FAM20BO75063 409 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 ANXA2P07355 339 aaKnown RBP13.73□□□□□ -0.21
ATL3-202ENST00000535789 LYNP07948 512 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 MRPL3P09001 348 aaKnown RBP13.73□□□□□ -0.21
ATL3-202ENST00000535789 THBS2P35442 1172 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 SRP9P49458 86 aaKnown RBP13.73□□□□□ -0.21
ATL3-202ENST00000535789 FAM3AP98173 230 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 TAF13Q15543 124 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 ZNF181Q2M3W8 571 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 SLC35D3Q5M8T2 416 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 RBM48Q5RL73 367 aaKnown RBP13.73□□□□□ -0.21
ATL3-202ENST00000535789 LRRN1Q6UXK5 716 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 FAM57BQ71RH2 274 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 SHFQ7M4L6 423 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 SLC16A9Q7RTY1 509 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 GID4Q8IVV7 300 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 C19orf18Q8NEA5 215 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 Q8TCH9 128 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 SPRYD4Q8WW59 207 aaPredicted RBP13.73□□□□□ -0.21
ATL3-202ENST00000535789 SGK3Q96BR1 496 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 Q96MT0 163 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 NR1H4Q96RI1 486 aaPredicted RBP13.73□□□□□ -0.21
ATL3-202ENST00000535789 TMEM165Q9HC07 324 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 MMP26Q9NRE1 261 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 COPS3Q9UNS2 423 aa13.73□□□□□ -0.21
ATL3-202ENST00000535789 A8MXK9 166 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 TRAPPC2LH3BP13 241 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 TBX1O43435 398 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 XRCC2O43543 280 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 FSHBP01225 129 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 CCDC159P0C7I6 412 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 ADRA2CP18825 462 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 ALOX5APP20292 161 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 CRHBPP24387 322 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 HSD11B1P28845 292 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 HTR1FP30939 366 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 MDH2P40926 338 aaKnown RBP13.72□□□□□ -0.21
ATL3-202ENST00000535789 SLC15A1P46059 708 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 ZNF91Q05481 1191 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 MEPCEQ7L2J0 689 aaKnown RBP13.72□□□□□ -0.21
ATL3-202ENST00000535789 PEG10Q86TG7 708 aaKnown RBP13.72□□□□□ -0.21
ATL3-202ENST00000535789 CELF2-AS1Q8N7Q2 184 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 DEFB108BQ8NET1 73 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 BPIFB6Q8NFQ5 453 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 REEP6Q96HR9 211 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 LYZL4Q96KX0 146 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms