RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 GSTT1P30711 240 aa13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 FGF12P61328 243 aa13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 CBX1P83916 185 aa13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 HOXA4Q00056 320 aaPredicted RBP13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 SLC9A3R2Q15599 337 aa13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 GPR157Q5UAW9 335 aa13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 SHFQ7M4L6 423 aa13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 DPY19L4Q7Z388 723 aa13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 IQCF1Q8N6M8 205 aa13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 REEP6Q96HR9 211 aa13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 C1orf147Q96MC9 270 aaPredicted RBP13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 MED20Q9H944 212 aa13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 MGAM2Q2M2H8 2515 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 ARRDC5A6NEK1 342 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 C22orf46C9J442 243 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 GNGT2O14610 69 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 SPRY1O43609 319 aaPredicted RBP13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 GLCEO94923 617 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 LIPFP07098 398 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 POU1F1P28069 291 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 BPIFB3P59826 476 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 FAM3AP98173 230 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 ZNF826PQ6ZT77 177 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 FAM57BQ71RH2 274 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 SLC16A9Q7RTY1 509 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 OR52H1Q8NGJ2 320 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 RNF133Q8WVZ7 376 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 ZDHHC16Q969W1 377 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 SGK3Q96BR1 496 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 CLPTM1LQ96KA5 538 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 ABHD6Q9BV23 337 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 ZNF747Q9BV97 191 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 OR10A2Q9H208 303 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 C1orf21Q9H246 121 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 OR51V1Q9H2C8 321 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 DNAJC27Q9NZQ0 273 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 CTSZQ9UBR2 303 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 PCDHGB1Q9Y5G3 927 aa13.46□□□□□ -0.25
CLSTN3-204ENST00000535313 GYPAP02724 150 aa13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 H2BFMP0C1H6 154 aa13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 HOXB6P17509 224 aaKnown RBP13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 EGR1P18146 543 aa13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 ZNF121P58317 390 aaPredicted RBP13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 SHISA2Q6UWI4 295 aa13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 BRD3OSQ6XYD6 125 aa13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 RHOUQ7L0Q8 258 aa13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 ADGRG5Q8IZF4 528 aa13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 GCSAMQ8N6F7 178 aa13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 PNLDC1Q8NA58 520 aaKnown RBP13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 SLC7A6OSQ96CW6 309 aaPredicted RBP13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 PCGF1Q9BSM1 259 aa13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 THTPAQ9BU02 230 aa13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 MARCH7Q9H992 704 aa13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 ZNF556Q9HAH1 456 aa13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 TAS2R1Q9NYW7 299 aa13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 PDP1Q9P0J1 537 aaPredicted RBP13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 SOX21Q9Y651 276 aaPredicted RBP13.45□□□□□ -0.26
CLSTN3-204ENST00000535313 AQP12BA6NM10 295 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 ZNF879B4DU55 563 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 PRR23D1E9PI22 279 aaPredicted RBP13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 P2RY10O00398 339 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 ACOT8O14734 319 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 TNFRSF13BO14836 293 aaPredicted RBP13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 E2F6O75461 281 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 PRR23D2P0DMB1 279 aaPredicted RBP13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 CFHR2P36980 270 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 GNALP38405 381 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 OPRL1P41146 370 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 IL13RA1P78552 427 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 GINS1Q14691 196 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 SNCBQ16143 134 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 GFOD2Q3B7J2 385 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 FAM90A1Q86YD7 464 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 AQP12AQ8IXF9 295 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 TIGD4Q8IY51 512 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 FTMTQ8N4E7 242 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 CSNK2A3Q8NEV1 391 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 PGAM5Q96HS1 289 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 RGCCQ9H4X1 137 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 RNPEPL1Q9HAU8 725 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 BRD7Q9NPI1 651 aa13.44□□□□□ -0.26
CLSTN3-204ENST00000535313 hCG_38984A0A1B0GV85 526 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 MDFIC2A0A1B0GVS7 189 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 TIPRLO75663 272 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 TOX4O94842 621 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 LHBP01229 141 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 HMGN1P05114 100 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 GSK3AP49840 483 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 BNIP1Q12981 228 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 MICBQ29980 383 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 DEFB112Q30KQ8 113 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 METTL11BQ5VVY1 283 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 TEX36Q5VZQ5 186 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 PLBD1Q6P4A8 553 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 PRSS45Q7RTY3 260 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 ZNF454Q8N9F8 522 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 OR1M1Q8NGA1 313 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 THEM6Q8WUY1 208 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 LRRC29Q8WV35 223 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms