RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 ABHD14AQ9BUJ0 271 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 TXNIPQ9H3M7 391 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 ADGRL4Q9HBW9 690 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 A0A1W2PPC4 97 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 SRFP11831 508 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 YBX1P67809 324 aaKnown RBP11.41□□□□□ -0.58
SPG11-203ENST00000535302 GUCA2AQ02747 115 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 HES3Q5TGS1 186 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 CLDN22Q8N7P3 220 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 OR10P1Q8NGE3 313 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 LRRC61Q9BV99 259 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 COMMD5Q9GZQ3 224 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 GAR1Q9NY12 217 aaKnown RBP11.41□□□□□ -0.58
SPG11-203ENST00000535302 IGHV3-43A0A0B4J1X8 118 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 M0R135 149 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 IGHV3-43DP0DP04 118 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 RNASEKQ6P5S7 137 aaKnown RBP11.41□□□□□ -0.58
SPG11-203ENST00000535302 ZNF799Q96GE5 643 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 KLK4Q9Y5K2 254 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 ETV7Q9Y603 341 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 KPTNQ9Y664 436 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 SCN3AQ9NY46 2000 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 SELEP16581 610 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 COX7A1P24310 79 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 ZNF620Q6ZNG0 422 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 OR52N1Q8NH53 320 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 MARCH1Q8TCQ1 289 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 BCO1Q9HAY6 547 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 COL16A1Q07092 1604 aaPredicted RBP11.41□□□□□ -0.58
SPG11-203ENST00000535302 DSCR3O14972 297 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 SNCGO76070 127 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 CD40P25942 277 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 RFX2P48378 723 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 ZNF85Q03923 595 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 SP6Q3SY56 376 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 RNFT1Q5M7Z0 435 aa11.41□□□□□ -0.58
SPG11-203ENST00000535302 SPAG17Q6Q759 2223 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 GPX5O75715 221 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 CST7O76096 145 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 RNASE1P07998 156 aaKnown RBP11.4□□□□□ -0.58
SPG11-203ENST00000535302 GP2P55259 537 aaKnown RBP11.4□□□□□ -0.58
SPG11-203ENST00000535302 PIGPP57054 158 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 DPTQ07507 201 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 UBE3DQ7Z6J8 389 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 WFDC3Q8IUB2 231 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 NKAIN3Q8N8D7 197 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 OR6K3Q8NGY3 331 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 TMEM174Q8WUU8 243 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 KCTD12Q96CX2 325 aaKnown RBP11.4□□□□□ -0.58
SPG11-203ENST00000535302 DUSP22Q9NRW4 184 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 H3BVH4 76 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 TPPP2P59282 170 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 SNRPGP62308 76 aaKnown RBP11.4□□□□□ -0.58
SPG11-203ENST00000535302 HMGN3Q15651 99 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 OPALINQ96PE5 141 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 ALKBH3Q96Q83 286 aaPredicted RBP11.4□□□□□ -0.58
SPG11-203ENST00000535302 OR51I2Q9H344 312 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 SERGEFQ9UGK8 458 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 RCL1Q9Y2P8 373 aaKnown RBP11.4□□□□□ -0.58
SPG11-203ENST00000535302 IL10RAQ13651 578 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 ANKRD53Q8N9V6 530 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 SLC25A22Q9H936 323 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 C20orf141Q9NUB4 165 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 SLCO1C1Q9NYB5 712 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 ICAM5Q9UMF0 924 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 B3GALT5Q9Y2C3 310 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 MN1Q10571 1320 aaPredicted RBP11.4□□□□□ -0.58
SPG11-203ENST00000535302 TTC3P53804 2025 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 TOGARAM1Q9Y4F4 1720 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 OR4C5Q8NGB2 326 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 PBOV1Q9GZY1 135 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 H7BYZ3 331 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 CYHR1Q6ZMK1 362 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 SFTPA1Q8IWL2 248 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 UCK1Q9HA47 277 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 TMEM9BQ9NQ34 198 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 UFC1Q9Y3C8 167 aa11.4□□□□□ -0.58
SPG11-203ENST00000535302 A0A1B0GUL6 1792 aa11.4□□□□□ -0.59
SPG11-203ENST00000535302 CCDC187A0A096LP49 1063 aa11.4□□□□□ -0.59
SPG11-203ENST00000535302 MRPL58Q14197 206 aaKnown RBP11.4□□□□□ -0.59
SPG11-203ENST00000535302 M1APQ8TC57 530 aa11.4□□□□□ -0.59
SPG11-203ENST00000535302 LAT2Q9GZY6 243 aa11.4□□□□□ -0.59
SPG11-203ENST00000535302 A4GNTQ9UNA3 340 aa11.4□□□□□ -0.59
SPG11-203ENST00000535302 R4GN57 208 aa11.4□□□□□ -0.59
SPG11-203ENST00000535302 ADAM10O14672 748 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 SRSF5Q13243 272 aaKnown RBP11.39□□□□□ -0.59
SPG11-203ENST00000535302 ZNF425Q6IV72 752 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 GUSBP11Q6P575 273 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 GABRG1Q8N1C3 465 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 PRSS35Q8N3Z0 413 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 AUNIPQ9H7T9 357 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 OPRK1P41145 380 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 OR4A4PQ8NGN8 299 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 SLC25A46Q96AG3 418 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 EAF1Q96JC9 268 aaPredicted RBP11.39□□□□□ -0.59
SPG11-203ENST00000535302 NRTNQ99748 197 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 ACTR3CQ9C0K3 210 aaPredicted RBP11.39□□□□□ -0.59
SPG11-203ENST00000535302 PCBP4P57723 403 aaKnown RBP11.39□□□□□ -0.59
SPG11-203ENST00000535302 DUSP8Q13202 625 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 OR13C8Q8NGS7 320 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms