RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 CNIH3Q8TBE1 160 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 TEX47Q8TBZ9 253 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 FAM162AQ96A26 154 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 NABP1Q96AH0 204 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 SGK3Q96BR1 496 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 HSH2DQ96JZ2 352 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 TSPAN32Q96QS1 320 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 COPS4Q9BT78 406 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 CDCA4Q9BXL8 241 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 GABARAPL3Q9BY60 117 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 HEXA-AS1Q9H8Q6 139 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 MAN2C1Q9NTJ4 1040 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 PPP1R14DQ9NXH3 145 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 CNOT2Q9NZN8 540 aaKnown RBP7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 TAAR3PQ9P1P4 343 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 ZNF346Q9UL40 294 aaKnown RBP7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 HIF3AQ9Y2N7 669 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 ALG5Q9Y673 324 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 RTTNQ86VV8 2226 aa7.32□□□□□ -1.24
SFSWAP-202ENST00000535202 A0A1W2PPL8 197 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 MFSD2BA6NFX1 497 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 NPIPB13A6NJU9 1138 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 A8MXK9 166 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 NPIPB4C9JG80 1138 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 PHF1O43189 567 aaPredicted RBP7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 SCO1O75880 301 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 NCR1O76036 304 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 IGHMP01871 453 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 MMP7P09237 267 aaPredicted RBP7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 TACSTD2P09758 323 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 NCK1P16333 377 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 ZNF32P17041 273 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 HNF1AP20823 631 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 COL8A2P25067 703 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 STOMP27105 288 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 FMO3P31513 532 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 RAD52P43351 418 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 GPR4P46093 362 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 GPR6P46095 362 aaPredicted RBP7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 UCP2P55851 309 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 KLF3P57682 345 aaPredicted RBP7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 ERVK-25P63136 954 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 MRPS34P82930 218 aaKnown RBP7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 GLO1Q04760 184 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 ZNF79Q15937 498 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 PABPC1L2AQ5JQF8 200 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 HACD4Q5VWC8 232 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 RNLSQ5VYX0 342 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 ELP2Q6IA86 826 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 FAHD1Q6P587 224 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 SLC25A47Q6Q0C1 308 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 ZNF730Q6ZMV8 503 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 CBLL1Q75N03 491 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 OAFQ86UD1 273 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 OR8H3Q8N146 312 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 LINC01356Q8N9X3 169 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 LRRC75AQ8NAA5 344 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 CPEB3Q8NE35 698 aaKnown RBP7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 OR1J1Q8NGS3 322 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 AKR7LQ8NHP1 331 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 SPATA3Q8NHX4 192 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 ZNF519Q8TB69 540 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 SYNPRQ8TBG9 265 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 SNX33Q8WV41 574 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 ACOT11Q8WXI4 607 aaPredicted RBP7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 C11orf40Q8WZ69 217 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 RDH5Q92781 318 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 HRASLS5Q96KN8 279 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 RBP7Q96R05 134 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 ALG12Q9BV10 488 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 BCL2L14Q9BZR8 327 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 C11orf54Q9H0W9 315 aaPredicted RBP7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 ZNF275Q9NSD4 429 aaPredicted RBP7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 DCAF13Q9NV06 445 aaKnown RBP7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 C14orf119Q9NWQ9 140 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 MCUBQ9NWR8 336 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 ERVK13-1Q9NX77 482 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 ENOPH1Q9UHY7 261 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 GPR160Q9UJ42 338 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 COPS3Q9UNS2 423 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 BAIAP2Q9UQB8 552 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 TMEM5Q9Y2B1 443 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 MAB21L2Q9Y586 359 aa7.31□□□□□ -1.24
SFSWAP-202ENST00000535202 A0A087WUU8 490 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 TMEM82A0PJX8 343 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 A6NIZ1 184 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 PCP4L1A6NKN8 68 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 C17orf100A8MU93 164 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 H7C1C5 153 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 FFAR1O14842 300 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 WBP4O75554 376 aaKnown RBP7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 LALBAP00709 142 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 IL1AP01583 271 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 GAAP10253 952 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 PIPP12273 146 aaPredicted RBP7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 ACHEP22303 614 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 LAP3P28838 519 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 RPL4P36578 427 aaKnown RBP7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 MAGEB1P43366 347 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 GDI2P50395 445 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms