RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 LIPAP38571 399 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 KIR3DL2P43630 455 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 DSCR9P59020 149 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 ACTC1P68032 377 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 ACTA1P68133 377 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 MVKQ03426 396 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 OR8B8Q15620 311 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 CDONQ4KMG0 1287 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 WDR38Q5JTN6 314 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 BCL2L15Q5TBC7 163 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 LHFPL3Q86UP9 236 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 C8orf59Q8N0T1 100 aaPredicted RBP11.86□□□□□ -0.51
VPS11-205ENST00000534551 PRSS35Q8N3Z0 413 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 ACBD7Q8N6N7 88 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 SETD9Q8NE22 299 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 OR13G1Q8NGZ3 307 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 CCL17Q92583 94 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 TFAP2CQ92754 450 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 C4orf36Q96KX1 117 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 Q96MT0 163 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 ALG8Q9BVK2 526 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 FGF23Q9GZV9 251 aaPredicted RBP11.86□□□□□ -0.51
VPS11-205ENST00000534551 ISG20L2Q9H9L3 353 aaKnown RBP11.86□□□□□ -0.51
VPS11-205ENST00000534551 CHODLQ9H9P2 273 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 MYOZ1Q9NP98 299 aaPredicted RBP11.86□□□□□ -0.51
VPS11-205ENST00000534551 TMEM100Q9NV29 134 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 NUFIP1Q9UHK0 495 aaKnown RBP11.86□□□□□ -0.51
VPS11-205ENST00000534551 OR52A1Q9UKL2 312 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 RHBDD3Q9Y3P4 386 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 CSPG4Q6UVK1 2322 aa11.86□□□□□ -0.51
VPS11-205ENST00000534551 A0A1B0GWJ7 208 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 A6NIN4 97 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 METTL15A6NJ78 407 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 SNTNA6NMZ2 147 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 P2RY10O00398 339 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 PPIHO43447 177 aaKnown RBP11.85□□□□□ -0.51
VPS11-205ENST00000534551 LMX1BO60663 402 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 FAM20BO75063 409 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 SLC25A16P16260 332 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 GIFP27352 417 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 DCTDP32321 178 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 MMP16P51512 607 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 MAB21L1Q13394 359 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 IL18R1Q13478 541 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 OR8G1Q15617 311 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 FAM220AQ7Z4H9 259 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 WDR86Q86TI4 376 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 MOGAT3Q86VF5 341 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 CATSPERDQ86XM0 798 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 PAPOLGQ9BWT3 736 aaKnown RBP11.85□□□□□ -0.51
VPS11-205ENST00000534551 OPA3Q9H6K4 179 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 ERVK13-1Q9NX77 482 aa11.85□□□□□ -0.51
VPS11-205ENST00000534551 RPL36Q9Y3U8 105 aaKnown RBP11.85□□□□□ -0.51
VPS11-205ENST00000534551 ARHGAP32A7KAX9 2087 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 J3QLW9 94 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 NDUFS8O00217 210 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 ZNF205O95201 554 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 CYB5R3P00387 301 aaPredicted RBP11.84□□□□□ -0.51
VPS11-205ENST00000534551 FAHP16930 419 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 ZNF19P17023 458 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 TNFSF4P23510 183 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 PMELP40967 661 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 CRYBB2P43320 205 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 GPR6P46095 362 aaPredicted RBP11.84□□□□□ -0.51
VPS11-205ENST00000534551 NANOS3P60323 173 aaKnown RBP11.84□□□□□ -0.51
VPS11-205ENST00000534551 RAB40BQ12829 278 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 RIPK1Q13546 671 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 DOC2BQ14184 412 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 MPPED2Q15777 294 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 FAM201AQ5SY85 155 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 ELMOD2Q8IZ81 293 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 FBLIM1Q8WUP2 373 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 HPSE2Q8WWQ2 592 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 SGCDQ92629 289 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 DIRC2Q96SL1 478 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 EGLN1Q9GZT9 426 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 MOB1AQ9H8S9 216 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 SP140LQ9H930 580 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 GCM1Q9NP62 436 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 UFSP2Q9NUQ7 469 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 MRPS18AQ9NVS2 196 aaKnown RBP11.84□□□□□ -0.51
VPS11-205ENST00000534551 MRPL15Q9P015 296 aaKnown RBP11.84□□□□□ -0.51
VPS11-205ENST00000534551 PCDHGB5Q9Y5G0 923 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 SNX5Q9Y5X3 404 aa11.84□□□□□ -0.51
VPS11-205ENST00000534551 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.84□□□□□ -0.517e-8■■■■□ 21.6
VPS11-205ENST00000534551 A0A0U1RQV5 110 aa11.83□□□□□ -0.52
VPS11-205ENST00000534551 LOC100289279A0A1B0GTE1 492 aa11.83□□□□□ -0.52
VPS11-205ENST00000534551 A0A1B0GTI1 187 aa11.83□□□□□ -0.52
VPS11-205ENST00000534551 ANKRD30BLA7E2S9 258 aa11.83□□□□□ -0.52
VPS11-205ENST00000534551 ZNF850A8MQ14 1090 aa11.83□□□□□ -0.52
VPS11-205ENST00000534551 CLDN25C9JDP6 229 aa11.83□□□□□ -0.52
VPS11-205ENST00000534551 E9PI62 339 aa11.83□□□□□ -0.52
VPS11-205ENST00000534551 C3orf80F5H4A9 247 aa11.83□□□□□ -0.52
VPS11-205ENST00000534551 SULT1C4O75897 302 aa11.83□□□□□ -0.52
VPS11-205ENST00000534551 LY6G6DO95868 133 aa11.83□□□□□ -0.52
VPS11-205ENST00000534551 LIMS3P0CW19 117 aa11.83□□□□□ -0.52
VPS11-205ENST00000534551 LIMS4P0CW20 117 aa11.83□□□□□ -0.52
VPS11-205ENST00000534551 ZNF16P17020 682 aaPredicted RBP11.83□□□□□ -0.52
VPS11-205ENST00000534551 USF1P22415 310 aaPredicted RBP11.83□□□□□ -0.52
VPS11-205ENST00000534551 ETV1P50549 477 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms