RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 OR2F1Q13607 317 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 SLC25A42Q86VD7 318 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 TMEM104Q8NE00 496 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 AQP3Q92482 292 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 EDEM2Q9BV94 578 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 SLCO5A1Q9H2Y9 848 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 SEBOXQ9HB31 216 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-226ENST00000533820 DUX4Q9UBX2 424 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 SULT2B1O00204 365 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 MPIG6BO95866 241 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 TTRP02766 147 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 ADCYAP1P18509 176 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 FSTP19883 344 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 BLOC1S1P78537 153 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 RNF212Q495C1 297 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 TMEM200AQ86VY9 491 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 FOXRED2Q8IWF2 684 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 NPRL2Q8WTW4 380 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 MAFIPQ8WZ33 124 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 C11orf40Q8WZ69 217 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 OR2S2Q9NQN1 319 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 RALGAPA1Q6GYQ0 2036 aa17.18■□□□□ 0.34
CAPN1-226ENST00000533820 ADAP1O75689 374 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 SRSF3P84103 164 aaKnown RBP17.17■□□□□ 0.34
CAPN1-226ENST00000533820 TMEM244Q5VVB8 128 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 DMBX1Q8NFW5 382 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 OR5D18Q8NGL1 313 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 TMED6Q8WW62 240 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 SLAMF6Q96DU3 332 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 RAB22AQ9UL26 194 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 MMACHCQ9Y4U1 282 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 CXorf65A6NEN9 183 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 NQO2P16083 231 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 CFPP27918 469 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 FOXK1P85037 733 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 ACY1Q03154 408 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 MEF2DQ14814 521 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 FAM76BQ5HYJ3 339 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 KLHL24Q6TFL4 600 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 ZNF813Q6ZN06 617 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 FOXRED1Q96CU9 486 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-226ENST00000533820 FAM71F1Q96KD3 344 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-226ENST00000533820 DMRT1Q9Y5R6 373 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 BCKDHBP21953 392 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 EMP2P54851 167 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 SPCS3P61009 180 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 HSF1Q00613 529 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 COL13A1Q5TAT6 717 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-226ENST00000533820 H3F3CQ6NXT2 135 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 ASB10Q8WXI3 467 aa17.17■□□□□ 0.34
CAPN1-226ENST00000533820 EFSO43281 561 aa17.16■□□□□ 0.34
CAPN1-226ENST00000533820 MELTFP08582 738 aa17.16■□□□□ 0.34
CAPN1-226ENST00000533820 GALNSP34059 522 aa17.16■□□□□ 0.34
CAPN1-226ENST00000533820 CCR5P51681 352 aa17.16■□□□□ 0.34
CAPN1-226ENST00000533820 TAS2R60P59551 318 aa17.16■□□□□ 0.34
CAPN1-226ENST00000533820 RBM39Q14498 530 aaKnown RBP17.16■□□□□ 0.34
CAPN1-226ENST00000533820 INPP5JQ15735 1006 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-226ENST00000533820 C1orf100Q5SVJ3 147 aa17.16■□□□□ 0.34
CAPN1-226ENST00000533820 GKN2Q86XP6 184 aa17.16■□□□□ 0.34
CAPN1-226ENST00000533820 OR1N1Q8NGS0 311 aa17.16■□□□□ 0.34
CAPN1-226ENST00000533820 OR4K15Q8NH41 348 aa17.16■□□□□ 0.34
CAPN1-226ENST00000533820 PBOV1Q9GZY1 135 aa17.16■□□□□ 0.34
CAPN1-226ENST00000533820 FRYLO94915 3013 aa17.16■□□□□ 0.34
CAPN1-226ENST00000533820 UBE2CO00762 179 aa17.16■□□□□ 0.34
CAPN1-226ENST00000533820 SOCS1O15524 211 aa17.16■□□□□ 0.34
CAPN1-226ENST00000533820 OR2T1O43869 369 aa17.16■□□□□ 0.34
CAPN1-226ENST00000533820 DHRS7BQ6IAN0 325 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-226ENST00000533820 TMEM71Q6P5X7 295 aa17.16■□□□□ 0.34
CAPN1-226ENST00000533820 GTPBP8Q8N3Z3 284 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-226ENST00000533820 MITD1Q8WV92 249 aa17.16■□□□□ 0.34
CAPN1-226ENST00000533820 CPNE2Q96FN4 548 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-226ENST00000533820 OR6C76A6NM76 312 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 FTCDNL1E5RQL4 147 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 MFAP5Q13361 173 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 UNQ6494/PRO21346Q6UXR6 183 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 COL4A2P08572 1712 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 TMEM218A2RU14 115 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 SDCBPO00560 298 aaPredicted RBP17.15■□□□□ 0.34
CAPN1-226ENST00000533820 TCAPO15273 167 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 ZNF93P35789 620 aaPredicted RBP17.15■□□□□ 0.34
CAPN1-226ENST00000533820 PNLIPRP2P54317 469 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 BPIFB3P59826 476 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 H1FNTQ75WM6 255 aaPredicted RBP17.15■□□□□ 0.34
CAPN1-226ENST00000533820 ABHD12BQ7Z5M8 362 aaPredicted RBP17.15■□□□□ 0.34
CAPN1-226ENST00000533820 ARRDC1Q8N5I2 433 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 EDAQ92838 391 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 RRNAD1Q96FB5 475 aaKnown RBP17.15■□□□□ 0.34
CAPN1-226ENST00000533820 PISDQ9UG56 409 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 FOXF1Q12946 379 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 TOMM20Q15388 145 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 RSPO4Q2I0M5 234 aaPredicted RBP17.15■□□□□ 0.34
CAPN1-226ENST00000533820 GLIPR1L1Q6UWM5 242 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 TLNRD1Q9H1K6 362 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 TREM2Q9NZC2 230 aa17.15■□□□□ 0.34
CAPN1-226ENST00000533820 ZNF20P17024 532 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 CD38P28907 300 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 OR3A4PP47883 348 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 DCAF7P61962 342 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 PLEKHN1Q494U1 663 aaPredicted RBP17.14■□□□□ 0.33
CAPN1-226ENST00000533820 SLC22A24Q8N4F4 322 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms