RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 ATF6BQ99941 703 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 DNTTIP1Q9H147 329 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 RERGLQ9H628 205 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 PNRC2Q9NPJ4 139 aaKnown RBP6.3□□□□□ -1.4
NXF1-215ENST00000533440 NRIP3Q9NQ35 241 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 INPP5EQ9NRR6 644 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 C14orf119Q9NWQ9 140 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 CAPN7Q9Y6W3 813 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 PLECQ15149 4684 aaKnown RBP6.29□□□□□ -1.4
NXF1-215ENST00000533440 IGLV1-36A0A0B4J1U3 117 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.29□□□□□ -1.4
NXF1-215ENST00000533440 A0A1W2PRX2 142 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 GGT3PA6NGU5 568 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 VGLL3A8MV65 326 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 M0R135 149 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 DCTN6O00399 190 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 BHLHE40O14503 412 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 PF4P02776 101 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 ANOS1P23352 680 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 GRK5P34947 590 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 GGT2P36268 569 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 IDH3AP50213 366 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 TPTEP56180 551 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 CAV3P56539 151 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 BLMHQ13867 455 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 DOC2BQ14184 412 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 CNN3Q15417 329 aaKnown RBP6.29□□□□□ -1.4
NXF1-215ENST00000533440 SNAI3Q3KNW1 292 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 KLHL22Q53GT1 634 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 CASC10Q5T4H9 136 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 GPR139Q6DWJ6 353 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 ZNF788Q6ZQV5 615 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 Q6ZS46 218 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 TMPRSS11FQ6ZWK6 438 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 RNF144BQ7Z419 303 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 ADCK1Q86TW2 530 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 RNF113BQ8IZP6 322 aaKnown RBP6.29□□□□□ -1.4
NXF1-215ENST00000533440 OFCC1Q8IZS5 231 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 MREGQ8N565 214 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 SLC26A10Q8NG04 563 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 OR9Q1Q8NGQ5 310 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 OR2AE1Q8NHA4 323 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 H1FXQ92522 213 aaKnown RBP6.29□□□□□ -1.4
NXF1-215ENST00000533440 DUS3LQ96G46 650 aaKnown RBP6.29□□□□□ -1.4
NXF1-215ENST00000533440 ZNF799Q96GE5 643 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 TSSK2Q96PF2 358 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 GPX7Q96SL4 187 aaPredicted RBP6.29□□□□□ -1.4
NXF1-215ENST00000533440 PITX2Q99697 317 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 EBF4Q9BQW3 602 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 CCDC28BQ9BUN5 200 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 PRSS22Q9GZN4 317 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 CYB5R1Q9UHQ9 305 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 TCF19Q9Y242 345 aa6.29□□□□□ -1.4
NXF1-215ENST00000533440 A0A087WUU8 490 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 A0A1W2PQ09 198 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 TMEM120BA0PK00 339 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 A6NDX4 124 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 NKX6-3A6NJ46 265 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 FAM90A8PA6NJQ4 464 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 ANGPTL7O43827 346 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 PTP4A3O75365 173 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 PEX14O75381 377 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 TXNDC12O95881 172 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 PAICSP22234 425 aaKnown RBP6.28□□□□□ -1.4
NXF1-215ENST00000533440 CRABP1P29762 137 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 OTX1P32242 354 aaPredicted RBP6.28□□□□□ -1.4
NXF1-215ENST00000533440 IFNA8P32881 189 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 NAA10P41227 235 aaPredicted RBP6.28□□□□□ -1.4
NXF1-215ENST00000533440 CDKN2AP42771 156 aaKnown RBP6.28□□□□□ -1.4
NXF1-215ENST00000533440 GPR4P46093 362 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 GSK3BP49841 420 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 SLC18A1P54219 525 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 CSNK2BP67870 215 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 MXRA7P84157 204 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 NFYCQ13952 458 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 TRAM2Q15035 370 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 DGUOKQ16854 277 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 RFX4Q33E94 735 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 RABL3Q5HYI8 236 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 TCTEX1D4Q5JR98 221 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 NKAPLQ5M9Q1 402 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 GLYATL3Q5SZD4 288 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 DNM1P34Q6PK57 102 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 MBOAT2Q6ZWT7 520 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 DPY19L4Q7Z388 723 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.28□□□□□ -1.4
NXF1-215ENST00000533440 LINC00346Q8IVM7 164 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 OR1M1Q8NGA1 313 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 OR5AU1Q8NGC0 362 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 OR5T2Q8NGG2 359 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 OR56B2PQ8NGI1 322 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 ANGPTL6Q8NI99 470 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 MED30Q96HR3 178 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 GAFA1Q96PS6 74 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 OR5M11Q96RB7 305 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 GPR61Q9BZJ8 451 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 TLNRD1Q9H1K6 362 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 MUC13Q9H3R2 512 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 HAO2Q9NYQ3 351 aa6.28□□□□□ -1.4
NXF1-215ENST00000533440 SLC25A10Q9UBX3 287 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms