RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 DTYMKP23919 212 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 CD276Q5ZPR3 534 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 B3GNTL1Q67FW5 361 aaPredicted RBP13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 GALNT16Q8N428 558 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 TAAR6Q96RI8 345 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 FBXO34Q9NWN3 711 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 ST3GAL6Q9Y274 331 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 TBX19O60806 448 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 BPIFB3P59826 476 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 MESP2Q0VG99 397 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 RAB35Q15286 201 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 SSX9Q7RTT3 188 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 CXorf67Q86X51 503 aaPredicted RBP13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 OSR2Q8N2R0 312 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 OR10P1Q8NGE3 313 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 MN1Q10571 1320 aaPredicted RBP13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 ZNF121P58317 390 aaPredicted RBP13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 OR2B11Q5JQS5 317 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 ARHGEF39Q8N4T4 335 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 TERB2Q8NHR7 220 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 MITD1Q8WV92 249 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 GNPNAT1Q96EK6 184 aaPredicted RBP13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 SMLR1H3BR10 107 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 OR10A3P58181 314 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 PRICKLE4Q2TBC4 344 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 TMEM108Q6UXF1 575 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 ZNF251Q9BRH9 671 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 GPR87Q9BY21 358 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 SLCO1C1Q9NYB5 712 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 ZNFX1Q9P2E3 1918 aaKnown RBP13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 TMEM235A6NFC5 223 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 POM121CA8CG34 1229 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 FABP7O15540 132 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 BMI1P35226 326 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 FCN2Q15485 313 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 KIR2DL1P43626 348 aaPredicted RBP13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 DHODHQ02127 395 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 TMEM41BQ5BJD5 291 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 ZNF439Q8NDP4 499 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 OR2G3Q8NGZ4 309 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 OR2A5Q96R48 311 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 ASPDHA6ND91 283 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 TAAR5O14804 337 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 MT-ND4LP03901 98 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 CT62P0C5K7 136 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 SPSB1Q96BD6 273 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 MBD1Q9UIS9 605 aaPredicted RBP13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 PURGQ9UJV8 347 aaKnown RBP13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 KRBOX1C9JBD0 128 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 OR5H8P0DN80 308 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 GABRA1P14867 456 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 CASP3P42574 277 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 SFTPA2Q8IWL1 248 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 SKA3Q8IX90 412 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 C17orf78Q8N4C9 275 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 GPX8Q8TED1 209 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 GALMQ96C23 342 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 RNF150Q9ULK6 438 aa13.28□□□□□ -0.28
PCDHA9-202ENST00000532602 KCNE1BA0A087WTH5 132 aa13.27□□□□□ -0.28
PCDHA9-202ENST00000532602 GNG3P63215 75 aa13.27□□□□□ -0.28
PCDHA9-202ENST00000532602 DRAM2Q6UX65 266 aa13.27□□□□□ -0.28
PCDHA9-202ENST00000532602 OR2G2Q8NGZ5 317 aa13.27□□□□□ -0.28
PCDHA9-202ENST00000532602 ESRP2Q9H6T0 727 aaKnown RBP13.27□□□□□ -0.28
PCDHA9-202ENST00000532602 IFITM5A6NNB3 132 aa13.27□□□□□ -0.28
PCDHA9-202ENST00000532602 DVL1O14640 695 aa13.27□□□□□ -0.28
PCDHA9-202ENST00000532602 DVL1P1P54792 670 aaPredicted RBP13.27□□□□□ -0.28
PCDHA9-202ENST00000532602 MICBQ29980 383 aa13.27□□□□□ -0.28
PCDHA9-202ENST00000532602 OR52I2Q8NH67 350 aa13.27□□□□□ -0.28
PCDHA9-202ENST00000532602 CFHR5Q9BXR6 569 aa13.27□□□□□ -0.28
PCDHA9-202ENST00000532602 NMES1Q9C002 83 aa13.27□□□□□ -0.28
PCDHA9-202ENST00000532602 SPRY3O43610 288 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 CYC1P08574 325 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 OPRM1P35372 400 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 SSTP61278 116 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 DUS3LQ96G46 650 aaKnown RBP13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 KNTC1P50748 2209 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 AQP7O14520 342 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 OR5G3P0C626 314 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 METTL15P1P0C7V9 234 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 MGMTP16455 207 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 BMP5P22003 454 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 RIMKLAQ8IXN7 391 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 TMEM230Q96A57 120 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 A4GNTQ9UNA3 340 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 ALG1L2C9J202 215 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 GLI4P10075 376 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 SRD5A2P31213 254 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 C3AR1Q16581 482 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 SLC7A6Q92536 515 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 YIPF5Q969M3 257 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 PRDM6Q9NQX0 595 aa13.27□□□□□ -0.29
PCDHA9-202ENST00000532602 ATF1P18846 271 aa13.26□□□□□ -0.29
PCDHA9-202ENST00000532602 FCGR2CP31995 323 aa13.26□□□□□ -0.29
PCDHA9-202ENST00000532602 VMA21Q3ZAQ7 101 aa13.26□□□□□ -0.29
PCDHA9-202ENST00000532602 C17orf107Q6ZR85 190 aa13.26□□□□□ -0.29
PCDHA9-202ENST00000532602 UBAC2Q8NBM4 344 aa13.26□□□□□ -0.29
PCDHA9-202ENST00000532602 SLC39A7Q92504 469 aa13.26□□□□□ -0.29
PCDHA9-202ENST00000532602 PATZ1Q9HBE1 687 aaKnown RBP13.26□□□□□ -0.29
PCDHA9-202ENST00000532602 STRAPQ9Y3F4 350 aaKnown RBP13.26□□□□□ -0.29
PCDHA9-202ENST00000532602 MYO16Q9Y6X6 1858 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms