RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 GABRG1Q8N1C3 465 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 TMEM217Q8N7C4 229 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 SLC38A9Q8NBW4 561 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 OR51A4Q8NGJ6 313 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 OR2AE1Q8NHA4 323 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 NRTNQ99748 197 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 DUSP21Q9H596 190 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 EXOSC3Q9NQT5 275 aaKnown RBP10.12□□□□□ -0.79
PTPRK-221ENST00000532331 POM121CA8CG34 1229 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 GPX5O75715 221 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 HOXD4P09016 255 aaPredicted RBP10.12□□□□□ -0.79
PTPRK-221ENST00000532331 SOX18P35713 384 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 HAAOP46952 286 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 GSK3AP49840 483 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 GP2P55259 537 aaKnown RBP10.12□□□□□ -0.79
PTPRK-221ENST00000532331 RAC3P60763 192 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 CDK5R1Q15078 307 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 C1orf185Q5T7R7 199 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 CELF2-AS1Q8N7Q2 184 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 ARHGDIGQ99819 225 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 B9D1Q9UPM9 204 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 TDRD15B5MCY1 1934 aaKnown RBP10.12□□□□□ -0.79
PTPRK-221ENST00000532331 ZNF816-ZNF321PA0A0X1KG74 233 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 DFFBO76075 338 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 CCL3P10147 92 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 PCSK6P29122 969 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 BTG1P62324 171 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 SMIM15Q7Z3B0 74 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 SUMF1Q8NBK3 374 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 OR51H1Q8NH63 302 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 SEC22CQ9BRL7 303 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 ADAT1Q9BUB4 502 aaKnown RBP10.12□□□□□ -0.79
PTPRK-221ENST00000532331 RAB33BQ9H082 229 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 FZR1Q9UM11 496 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 OR2M5A3KFT3 312 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 SUB1P53999 127 aaKnown RBP eCLIP10.12□□□□□ -0.79
PTPRK-221ENST00000532331 GNB1P62873 340 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 KLRB1Q12918 225 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 SVBPQ8N300 66 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 OR52I2Q8NH67 350 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 RNF141Q8WVD5 230 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 CCL17Q92583 94 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 A0A1B0GVG6 124 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 TCRBV16S1A1N1A0A5B0 115 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 AGAP14A8MT82 685 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 GREM1O60565 184 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 SMIM18P0DKX4 95 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 NME2P22392 152 aa10.12□□□□□ -0.79
PTPRK-221ENST00000532331 SCAF4O95104 1147 aaKnown RBP10.11□□□□□ -0.79
PTPRK-221ENST00000532331 DDOSTP39656 456 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 UBE2KP61086 200 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 CD276Q5ZPR3 534 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 BTNL3Q6UXE8 466 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 TMEM179BQ7Z7N9 219 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 OR13G1Q8NGZ3 307 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 RDH5Q92781 318 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 S1PR3Q99500 378 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 ERRFI1Q9UJM3 462 aaPredicted RBP10.11□□□□□ -0.79
PTPRK-221ENST00000532331 NEU3Q9UQ49 428 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 PRR19A6NJB7 356 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 C16orf97H3BN30 126 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 ALOX5APP20292 161 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 RPS27P42677 84 aaKnown RBP10.11□□□□□ -0.79
PTPRK-221ENST00000532331 RPL11P62913 178 aaKnown RBP10.11□□□□□ -0.79
PTPRK-221ENST00000532331 TNFAIP6P98066 277 aaPredicted RBP10.11□□□□□ -0.79
PTPRK-221ENST00000532331 FGF20Q9NP95 211 aaPredicted RBP10.11□□□□□ -0.79
PTPRK-221ENST00000532331 DNAJB12Q9NXW2 375 aaKnown RBP10.11□□□□□ -0.79
PTPRK-221ENST00000532331 SCN10AQ9Y5Y9 1956 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 F6UZH7 168 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 NXPH3O95157 252 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 FABP1P07148 127 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 RAB4AP20338 218 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 HNF1AP20823 631 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 ZNF121P58317 390 aaPredicted RBP10.11□□□□□ -0.79
PTPRK-221ENST00000532331 MICBQ29980 383 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 PRAMEF5Q5TYX0 476 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 PRAMEF6Q5VXH4 476 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 SLC51BQ86UW2 128 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 OIT3Q8WWZ8 545 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 TAAR3PQ9P1P4 343 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 SLC22A13Q9Y226 551 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 A0A0B4J2E0 115 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 A0A1B0GX12 115 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 SERTM1A2A2V5 107 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 C10orf90Q96M02 699 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 ZNF2Q9BSG1 426 aaPredicted RBP10.11□□□□□ -0.79
PTPRK-221ENST00000532331 RNF167Q9H6Y7 350 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 RAB27BO00194 218 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 MAGEB4O15481 346 aaPredicted RBP10.11□□□□□ -0.79
PTPRK-221ENST00000532331 ACP1P24666 158 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 S100A11P31949 105 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 PPT1P50897 306 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 HMGN3Q15651 99 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 CALHM3Q86XJ0 350 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 TTTY12Q9BZ98 90 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 A4GNTQ9UNA3 340 aa10.11□□□□□ -0.79
PTPRK-221ENST00000532331 DUSP1P28562 367 aa10.1□□□□□ -0.79
PTPRK-221ENST00000532331 ZNF626Q68DY1 528 aa10.1□□□□□ -0.79
PTPRK-221ENST00000532331 HPSE2Q8WWQ2 592 aa10.1□□□□□ -0.79
PTPRK-221ENST00000532331 GPATCH2Q9NW75 528 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms