RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 ST3GAL4Q11206 333 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 SRSF9Q13242 221 aaKnown RBP eCLIP4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 GTF2H2Q13888 395 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 TRIP6Q15654 476 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 CD226Q15762 336 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 DCST2Q5T1A1 773 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 CST9Q5W186 159 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 PVRIGQ6DKI7 326 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 GTF2H2CQ6P1K8 395 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 SYCE2Q6PIF2 218 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 SLC36A1Q7Z2H8 476 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 MMGT1Q8N4V1 131 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 TMEM161BQ8NDZ6 487 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 OR11H1Q8NG94 326 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 OR11H2Q8NH07 326 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 OSR1Q8TAX0 266 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 QKIQ96PU8 341 aaKnown RBP eCLIP4.42□□□□□ -1.72e-34■■■■■ 33
ECHDC1-222ENST00000531967 DOK1Q99704 481 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 BOLA2Q9H3K6 86 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 MAP1LC3AQ9H492 121 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 SLIT1O75093 1534 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 PHRF1Q9P1Y6 1649 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 TCP10L2B9ZVM9 353 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 ANKRD63C9JTQ0 380 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 K7ERI5 159 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 CRXO43186 299 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 SYNGR1O43759 233 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 S100A8P05109 93 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 HOXB7P09629 217 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 DLX6P56179 175 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 TCL1AP56279 114 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 ABCE1P61221 599 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 BLOC1S1P78537 153 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 CD300CQ08708 224 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 APOFQ13790 326 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 CDK10Q15131 360 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 TTLL9Q3SXZ7 439 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 FAM120AOSQ5T036 256 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 ATP1A1-AS1Q5TC04 95 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 HBMQ6B0K9 141 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 ZNF585AQ6P3V2 769 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 ZNF790Q6PG37 636 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 MRGPREQ86SM8 312 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 IFNEQ86WN2 208 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 CCDC71Q8IV32 467 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 OR4N5Q8IXE1 308 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 C11orf45Q8TAV5 145 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 HAVCR2Q8TDQ0 301 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 ADGRG7Q96K78 797 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 MLST8Q9BVC4 326 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 OSBPL11Q9BXB4 747 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 ACTR6Q9GZN1 396 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 DDX31Q9H8H2 851 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 TMEM45AQ9NWC5 275 aa4.42□□□□□ -1.7
ECHDC1-222ENST00000531967 MYH1P12882 1939 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 TGIF2-C20orf24A0A0A6YYL0 155 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 MEIOCA2RUB1 952 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 GMNCA6NCL1 334 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 FAM166BA8MTA8 275 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 TSTD3H0UI37 97 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 CD8AP01732 235 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 PCCAP05165 728 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 EGR2P11161 476 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 SCGB1A1P11684 91 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 ALOX5APP20292 161 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 CALML3P27482 149 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 ESRRGP62508 458 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 IL5RAQ01344 420 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 TGFBR3Q03167 851 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 ZNF91Q05481 1191 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 FAM106AQ4KMX7 169 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 ASPRV1Q53RT3 343 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 SLC30A8Q8IWU4 369 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 C4orf33Q8N1A6 199 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 SLC35F6Q8N357 371 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 OR10K1Q8NGX5 313 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 C16orf78Q8WTQ4 265 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 IGFBPL1Q8WX77 278 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 SORT1Q99523 831 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 AIF1LQ9BQI0 150 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 GLS2Q9UI32 602 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 VPREB3Q9UKI3 123 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 TP53TG5Q9Y2B4 290 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 RPL36Q9Y3U8 105 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 TMEM56-RWDD3S4R434 201 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 ARHGAP23Q9P227 1491 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 MYH6P13533 1939 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 KIF13BQ9NQT8 1826 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 RPS10-NUDT3A0A1W2PQS6 291 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 ZG16O60844 167 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 FAM20BO75063 409 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 POP7O75817 140 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 NUDT3O95989 172 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 IGHV2-5P01817 119 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 FGF1P05230 155 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 RPLP0P05388 317 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 HOXC4P09017 264 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 SERPINA2P20848 420 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 IFNGR2P38484 337 aa4.41□□□□□ -1.7
ECHDC1-222ENST00000531967 ZFP36L2P47974 494 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms