RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 PRSS48Q7RTY5 328 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 CCDC54Q8NEL0 328 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 NEU4Q8WWR8 484 aaPredicted RBP13.67□□□□□ -0.22
BRK1-201ENST00000530758 SGCDQ92629 289 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 FOXC2Q99958 501 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 RAB1BQ9H0U4 201 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 MRPL15Q9P015 296 aaKnown RBP13.67□□□□□ -0.22
BRK1-201ENST00000530758 ERVK-18Q9QC07 812 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 SLC22A13Q9Y226 551 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 PLSCR5A0PG75 271 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 OR4C45A6NMZ5 311 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 DHRS7CA6NNS2 312 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 E9PI62 339 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 OGG1O15527 345 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 RGS10O43665 173 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 F12P00748 615 aaPredicted RBP13.66□□□□□ -0.22
BRK1-201ENST00000530758 CD55P08174 381 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 NAT2P11245 290 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 KIR3DL2P43630 455 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 PTH2RP49190 550 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 ZNF81P51508 661 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 ACSM1Q08AH1 577 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 PCGF3Q3KNV8 242 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 ZBTB37Q5TC79 503 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 RPL22L1Q6P5R6 122 aaKnown RBP13.66□□□□□ -0.22
BRK1-201ENST00000530758 CSNK2A3Q8NEV1 391 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 OR13G1Q8NGZ3 307 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 OR51E1Q8TCB6 317 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 SOX7Q9BT81 388 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 SLC22A4Q9H015 551 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 CXXC4Q9H2H0 198 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 DYNLRB1Q9NP97 96 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 GPR84Q9NQS5 396 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 ERGIC3Q9Y282 383 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 V9GYS6 101 aa13.66□□□□□ -0.22
BRK1-201ENST00000530758 MAP1AP78559 2803 aaPredicted RBP13.65□□□□□ -0.22
BRK1-201ENST00000530758 GGT3PA6NGU5 568 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 ZSCAN5BA6NJL1 495 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 LILRA1O75019 489 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 MTRF1O75570 445 aaKnown RBP13.65□□□□□ -0.22
BRK1-201ENST00000530758 DHRS3O75911 302 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 CD1AP06126 327 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 UBCP0CG48 685 aaKnown RBP13.65□□□□□ -0.22
BRK1-201ENST00000530758 MAP2K3P46734 347 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 EFNA4P52798 201 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 WNT4P56705 351 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 FAM209AQ5JX71 171 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 TMEM244Q5VVB8 128 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 PRSS57Q6UWY2 283 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 DOK3Q7L591 496 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 KLBQ86Z14 1044 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 ZCCHC24Q8N2G6 241 aaKnown RBP13.65□□□□□ -0.22
BRK1-201ENST00000530758 OR14K1Q8NGZ2 314 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 GATAD2BQ8WXI9 593 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 SORCS2Q96PQ0 1159 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 MND1Q9BWT6 205 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 TMEM100Q9NV29 134 aa13.65□□□□□ -0.22
BRK1-201ENST00000530758 LSM2Q9Y333 95 aaKnown RBP13.65□□□□□ -0.22
BRK1-201ENST00000530758 ZNF469Q96JG9 3925 aaPredicted RBP13.64□□□□□ -0.23
BRK1-201ENST00000530758 ITPR3Q14573 2671 aa13.64□□□□□ -0.23
BRK1-201ENST00000530758 GMDSO60547 372 aa13.64□□□□□ -0.23
BRK1-201ENST00000530758 LALBAP00709 142 aa13.64□□□□□ -0.23
BRK1-201ENST00000530758 CST4P01036 141 aa13.64□□□□□ -0.23
BRK1-201ENST00000530758 IGHV1-46P01743 117 aa13.64□□□□□ -0.23
BRK1-201ENST00000530758 IGHV4-39P01824 125 aa13.64□□□□□ -0.23
BRK1-201ENST00000530758 ACKR3P25106 362 aa13.64□□□□□ -0.23
BRK1-201ENST00000530758 GTF2A1P52655 376 aaPredicted RBP13.64□□□□□ -0.23
BRK1-201ENST00000530758 BDH1Q02338 343 aa13.64□□□□□ -0.23
BRK1-201ENST00000530758 DNM1P46Q6ZS02 220 aa13.64□□□□□ -0.23
BRK1-201ENST00000530758 OR56B2PQ8NGI1 322 aa13.64□□□□□ -0.23
BRK1-201ENST00000530758 VRK1Q99986 396 aaPredicted RBP13.64□□□□□ -0.23
BRK1-201ENST00000530758 BARX1Q9HBU1 254 aaPredicted RBP13.64□□□□□ -0.23
BRK1-201ENST00000530758 MSL2Q9HCI7 577 aa13.64□□□□□ -0.23
BRK1-201ENST00000530758 NOP16Q9Y3C1 178 aaKnown RBP13.64□□□□□ -0.23
BRK1-201ENST00000530758 PRRC2AP48634 2157 aaKnown RBP13.64□□□□□ -0.23
BRK1-201ENST00000530758 TMEM212A6NML5 194 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 P2RY10O00398 339 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 MYL12BO14950 172 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 MLNRO43193 412 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 NDUFS7O75251 213 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 ZFPL1O95159 310 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 PTBP3O95758 552 aaKnown RBP13.63□□□□□ -0.23
BRK1-201ENST00000530758 MT-ND2P03891 347 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 ERCC1P07992 297 aaPredicted RBP13.63□□□□□ -0.23
BRK1-201ENST00000530758 ZNF12P17014 697 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 PRSS12P56730 875 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 TAS2R43P59537 309 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 MRPS11P82912 194 aaKnown RBP13.63□□□□□ -0.23
BRK1-201ENST00000530758 RIPPLY1Q0D2K3 151 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 CDK5R1Q15078 307 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 GFOD2Q3B7J2 385 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 DMKNQ6E0U4 476 aaPredicted RBP13.63□□□□□ -0.23
BRK1-201ENST00000530758 XAF1Q6GPH4 301 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 OR5AS1Q8N127 324 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 FTMTQ8N4E7 242 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 CELF2-AS1Q8N7Q2 184 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 SEMA6DQ8NFY4 1073 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 GTF3AQ92664 365 aaKnown RBP13.63□□□□□ -0.23
BRK1-201ENST00000530758 C10orf35Q96D05 121 aa13.63□□□□□ -0.23
BRK1-201ENST00000530758 ISYNA1Q9NPH2 558 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms