RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 SPTSSAQ969W0 71 aa13.19□□□□□ -0.3
COL16A1-216ENST00000529928 PPA2Q9H2U2 334 aa13.19□□□□□ -0.3
COL16A1-216ENST00000529928 KRCC1Q9NPI7 259 aaPredicted RBP13.19□□□□□ -0.3
COL16A1-216ENST00000529928 PNRC2Q9NPJ4 139 aaKnown RBP13.19□□□□□ -0.3
COL16A1-216ENST00000529928 SIRT7Q9NRC8 400 aa13.19□□□□□ -0.3
COL16A1-216ENST00000529928 IGHV3OR15-7A0A075B7D8 119 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 TRBV4-1A0A0J9YWV2 114 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 BHLHE40O14503 412 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 ARPC2O15144 300 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 DIRAS1O95057 198 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 FAM107AO95990 144 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 RENP00797 406 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 MUC1P15941 1255 aaPredicted RBP13.18□□□□□ -0.3
COL16A1-216ENST00000529928 OMPP47874 163 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 ZNF92Q03936 586 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 POU4F2Q12837 409 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 SEC23BQ15437 767 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 MICBQ29980 383 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 RFX4Q33E94 735 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 SNAI3Q3KNW1 292 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 SPATS1Q496A3 300 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 SMARCD3Q6STE5 483 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 SLC36A1Q7Z2H8 476 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 DEFB107AQ8IZN7 70 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 OR2AE1Q8NHA4 323 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 MRAPQ8TCY5 172 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 ERMAPQ96PL5 475 aaPredicted RBP13.18□□□□□ -0.3
COL16A1-216ENST00000529928 NMNAT3Q96T66 252 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 MAGEL2Q9UJ55 1249 aa13.18□□□□□ -0.3
COL16A1-216ENST00000529928 UNC119BA6NIH7 251 aa13.17□□□□□ -0.3
COL16A1-216ENST00000529928 PLXNB1O43157 2135 aa13.17□□□□□ -0.3
COL16A1-216ENST00000529928 HLA-DQA2P01906 255 aa13.17□□□□□ -0.3
COL16A1-216ENST00000529928 H1F0P07305 194 aaKnown RBP13.17□□□□□ -0.3
COL16A1-216ENST00000529928 T-ENOLP0DO92 83 aa13.17□□□□□ -0.3
COL16A1-216ENST00000529928 GRK5P34947 590 aa13.17□□□□□ -0.3
COL16A1-216ENST00000529928 SAA4P35542 130 aa13.17□□□□□ -0.3
COL16A1-216ENST00000529928 PCK2Q16822 640 aa13.17□□□□□ -0.3
COL16A1-216ENST00000529928 FGD3Q5JSP0 725 aa13.17□□□□□ -0.3
COL16A1-216ENST00000529928 ZBTB46Q86UZ6 589 aa13.17□□□□□ -0.3
COL16A1-216ENST00000529928 CFHR4Q92496 578 aa13.17□□□□□ -0.3
COL16A1-216ENST00000529928 PYURFQ96I23 114 aa13.17□□□□□ -0.3
COL16A1-216ENST00000529928 MAP6Q96JE9 813 aa13.17□□□□□ -0.3
COL16A1-216ENST00000529928 CCL13Q99616 98 aa13.17□□□□□ -0.3
COL16A1-216ENST00000529928 OPA3Q9H6K4 179 aa13.17□□□□□ -0.3
COL16A1-216ENST00000529928 RNPEPL1Q9HAU8 725 aa13.17□□□□□ -0.3
COL16A1-216ENST00000529928 RPRD1BQ9NQG5 326 aaKnown RBP13.17□□□□□ -0.3
COL16A1-216ENST00000529928 KCNG2Q9UJ96 466 aa13.17□□□□□ -0.3
COL16A1-216ENST00000529928 A0A1B0GW55 424 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 MEIOCA2RUB1 952 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 NDUFB3O43676 98 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 DUX4L2P0CJ85 424 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 DUX4L3P0CJ86 424 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 DUX4L4P0CJ87 422 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 DUX4L5P0CJ88 424 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 DUX4L6P0CJ89 424 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 DUX4L7P0CJ90 424 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 EFNB2P52799 333 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 LOXL3P58215 753 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 WDR38Q5JTN6 314 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 GLYATL3Q5SZD4 288 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 DUX4L9Q6RFH8 374 aaPredicted RBP13.16□□□□□ -0.3
COL16A1-216ENST00000529928 DRAM2Q6UX65 266 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 C16orf89Q6UX73 402 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 FGFRL1Q8N441 504 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 NDE1Q9NXR1 346 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 DUX4Q9UBX2 424 aa13.16□□□□□ -0.3
COL16A1-216ENST00000529928 PRPF19Q9UMS4 504 aaKnown RBP13.16□□□□□ -0.3
COL16A1-216ENST00000529928 FAM32AQ9Y421 112 aaKnown RBP13.16□□□□□ -0.3
COL16A1-216ENST00000529928 A0A1W2PRD5 423 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 A0A1W2PRF3 423 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 A0A1W2PRM7 423 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 ARPC3O15145 178 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 XPNPEP2O43895 674 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 SLC6A6P31641 620 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 OTX1P32242 354 aaPredicted RBP13.15□□□□□ -0.3
COL16A1-216ENST00000529928 KIR2DS4P43632 304 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 UBE2E1P51965 193 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 ACSM1Q08AH1 577 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 DBPQ10586 325 aaPredicted RBP13.15□□□□□ -0.3
COL16A1-216ENST00000529928 C1orf122Q6ZSJ8 110 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 LNX2Q8N448 690 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 FAM216BQ8N7L0 139 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 Q8N7P7 452 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 C11orf44Q8N8P7 122 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 BEND2Q8NDZ0 799 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 OR56B2PQ8NGI1 322 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 OR4C13Q8NGP0 309 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 OR8S1Q8NH09 359 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 OR4K13Q8NH42 304 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 OR2T6Q8NHC8 308 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 FANK1Q8TC84 345 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 LRRC29Q8WV35 223 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 C12orf43Q96C57 262 aaKnown RBP13.15□□□□□ -0.3
COL16A1-216ENST00000529928 NSMCE2Q96MF7 247 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 DCTN5Q9BTE1 182 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 DNAJB11Q9UBS4 358 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 FOXJ3Q9UPW0 622 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 V9GYQ6 96 aa13.15□□□□□ -0.3
COL16A1-216ENST00000529928 ANKRD30BLA7E2S9 258 aa13.14□□□□□ -0.31
COL16A1-216ENST00000529928 B2RBV5 119 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms